Pairwise Alignments

Query, 597 a.a., ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 536 a.a., conserved hypothetical protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 57.4 bits (137), Expect = 1e-12
 Identities = 90/360 (25%), Positives = 146/360 (40%), Gaps = 46/360 (12%)

Query: 80  LRYSKLTIGLWLSCA-----LLTLPITYSNADWFHTLGRLVGLWAGFTLFLVLQQFRFS- 133
           +RY  L I  +L CA      +  PI      W+ ++  L+      + F  +  F +S 
Sbjct: 12  MRYKVLYILAFLLCANSLFLQIESPIITIGDKWYASIILLLLFLIANSTFS-MSSFSWSL 70

Query: 134 NKHKQRLLWFILLGSVIEAVIGLIQYFWLEPGNPF-GYDTEANRPYGIFQQPNVMASFLA 192
           NK        +LL  V+ A+ G++QY  + P + + G         G F  P   A+ L 
Sbjct: 71  NKLLPSFYIIVLLSDVVLAMHGILQYTHIIPFHSYLGLS-------GSFDNPAGYAASLC 123

Query: 193 TGLVLSGYLLARQPEKYDSRWSKIGILYATPLLTAPLLVVLASRTGWLASLLSIALVAPY 252
            G     Y+       Y S+  +  ++ A  L    ++V+  SRTG L+  +++  +  +
Sbjct: 124 AGFPAVFYIYMH----YCSKLIRGSVILAG-LCVIIVVVLSGSRTGILS--IAVMCIVCF 176

Query: 253 LYR--FASRRRFTLWLLAITLGICAGFTAMYGQGTSGFVANKADLESPRRFTFPQTIDMI 310
           L +    SR+++ L LL +        T +Y          K D    R   +  +  MI
Sbjct: 177 LQKTEIGSRKKYLLLLLLL---FPVFVTLLY--------FFKKDSADGRLLIWKCSALMI 225

Query: 311 IEKPFTGYGYGKFEAQYLLYTAR--QHQLNSSYPAGLASMDHPHNELLYWGVEGGLLPVM 368
            + P TGYG G F A Y+ Y A       ++ Y      + HP NE +   V  GL+   
Sbjct: 226 KDNPVTGYGSGGFLANYMNYQAEYFARDTDNKYAMLAGDVKHPFNEYILLVVNYGLI--- 282

Query: 369 GILLAACFCALRIYAAKRG----TRMAMLALFVPITLHAQLEYPFYHSAIHWITFIILIY 424
           G LL   F        +R     T +A + L + I + A   YP  +  + W+  I  IY
Sbjct: 283 GFLLFLTFVYFLWKCYRRNSCLETNIATVCL-IGIAVFACFSYPLSYPFV-WVMMIYSIY 340