Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 1236 a.a., methionine synthase from Pseudomonas fluorescens FW300-N2C3

 Score = 1580 bits (4091), Expect = 0.0
 Identities = 797/1226 (65%), Positives = 967/1226 (78%), Gaps = 14/1226 (1%)

Query: 9    LEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIKEI 68
            L+Q LK+RIL++DGGMGTMIQSYKL+E+DYRG RF DW  D+KGNNDLLVL++P +I  I
Sbjct: 11   LQQALKERILILDGGMGTMIQSYKLEEQDYRGKRFADWPSDVKGNNDLLVLSRPDVIGAI 70

Query: 69   HSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSRPR 128
              AYL+AGADILETNTFN+T ++ ADY MQ L+ E+N   A+LAR+VAD  T + P +PR
Sbjct: 71   EKAYLDAGADILETNTFNATQVSQADYGMQGLAYELNLEGARLARQVADAKTLETPDKPR 130

Query: 129  YVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFDTL 188
            +VAGVLGPT+RTCS+SPDVN+PG+RNVTFD LVE Y+E+T+ LI+GG+DLILIETIFDTL
Sbjct: 131  FVAGVLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADLILIETIFDTL 190

Query: 189  NAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFGLNC 248
            NAKA  FAV  V+EELG+ LP+MISGTITDASGRTLSGQTTEAF+N++ H +PIS GLNC
Sbjct: 191  NAKAAIFAVQGVYEELGVELPIMISGTITDASGRTLSGQTTEAFWNSVAHAKPISVGLNC 250

Query: 249  ALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQAGFLNLV 308
            ALG  ELR Y+EELS  +  +VSAHPNAGLPN FGEYD    E A+ I E+AQ+GFLN+V
Sbjct: 251  ALGASELRPYLEELSNKASTHVSAHPNAGLPNEFGEYDELPAETAKVIEEFAQSGFLNIV 310

Query: 309  GGCCGTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVGERTNVTG 368
            GGCCGTTP HI AIAKAV G  PR +P++   CRLSGLEP  I   +LFVNVGERTN+TG
Sbjct: 311  GGCCGTTPAHIEAIAKAVAGYAPRPIPEIPRACRLSGLEPFTIDRSSLFVNVGERTNITG 370

Query: 369  SARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEPEIS 428
            SA+F RLI+E+ Y EAL+VA +QVE GAQ+IDINMDEGMLD++  MV FLNL A EP+IS
Sbjct: 371  SAKFARLIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFLNLIAGEPDIS 430

Query: 429  KVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIVMAFDE 488
            +VP+M+DSSKWEVIEAGLKCIQGKGIVNSIS+KEG E+FI  AKL +RYGAAV+VMAFDE
Sbjct: 431  RVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHAKLCKRYGAAVVVMAFDE 490

Query: 489  VGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDFINAVA 548
             GQADT  RK EIC+R+Y ILV+EVGFPPEDIIFDPNIFAVATGI+EHNNYA+DFINA A
Sbjct: 491  AGQADTEARKKEICKRSYDILVNEVGFPPEDIIFDPNIFAVATGIEEHNNYAVDFINACA 550

Query: 549  DIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQLEIYDN 608
             I+ ELP+A+ SGGVSNVSFSFRGNN VREAIH+VFL +  + G+ MGIVNAGQLEIYD 
Sbjct: 551  YIRDELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLYAIRAGLTMGIVNAGQLEIYDQ 610

Query: 609  VPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWPVAKRLEHAL 668
            +P +LR+AVEDVILNR  +GT+ LL IA+ Y+ +  G  ++A   EWR W V KRLEHAL
Sbjct: 611  IPAELRDAVEDVILNRTPEGTDALLAIADKYKGD--GSVKEAETEEWRGWEVNKRLEHAL 668

Query: 669  VKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQ 728
            VKGIT  IV+DTEE+R   ++P+EVIEGPLM GMN+VGDLFG GKMFLPQVVKSARVMKQ
Sbjct: 669  VKGITTHIVEDTEESRLSFTRPIEVIEGPLMAGMNIVGDLFGAGKMFLPQVVKSARVMKQ 728

Query: 729  AVAYLEPFINAQKSGS-TSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIIDLGVMVPC 787
            AVA+L PFI A+K     + GKIL+ATVKGDVHDIGKNIVGVVL CN ++I+DLGVMVP 
Sbjct: 729  AVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPA 788

Query: 788  EQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSKAHTAVKI 847
            E+IL+VA+EQ  DIIGLSGLITPSLDEMVHVA+EM+RQ F LPL+IGGATTSKAHTAVKI
Sbjct: 789  EKILQVAKEQKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAVKI 848

Query: 848  EQNY-HAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQHARKTPKSRPVT 906
            E  Y +  V+YV +ASRAVGV T LLS E +P F+E+   DY   R++ A ++ ++  ++
Sbjct: 849  EPKYSNDAVIYVTDASRAVGVATQLLSKELKPAFVEKTRQDYIEVRERTANRSARTERLS 908

Query: 907  LEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFMTWSLMGKYPAIL 966
               A A K   DW++Y P  P   G  V +NI L  L  YIDWTPFF++W L GKYP IL
Sbjct: 909  YPAAVAKKPQFDWSSYQPVKPTFTGAKVLDNIDLNVLAEYIDWTPFFISWDLAGKYPRIL 968

Query: 967  EHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASV-GDDIEVYSDESRTQVA 1025
              E VGE A  L+ DA A+L K+  E L+ A  +   +PA  V  DD+EVY D+ +    
Sbjct: 969  TDEVVGEAATALYADARAMLRKLIDEKLISARAVFGFWPANQVHDDDLEVYGDDGKPLAR 1028

Query: 1026 HVLYNLRQQTEKPKG-ANYCLSDYVAPKESGKRDWIGAFAVTGGIGERALADAYKAQGDD 1084
              L++LRQQ  K  G  N+ L+D+VAPK+SG  D++G F  T GIG   +A AY+  GDD
Sbjct: 1029 --LHHLRQQIIKTDGKPNFSLADFVAPKDSGVTDYVGGFITTAGIGAEEVAKAYQEAGDD 1086

Query: 1085 YNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQGIRPAPGYPAC 1144
            YN+IM++A+ADRLAEA AE+LH++VRKE WGYA DE+L N+ LI+E+Y GIRPAPGYPAC
Sbjct: 1087 YNSIMVKALADRLAEACAEWLHQQVRKEHWGYARDESLDNEALIKEQYTGIRPAPGYPAC 1146

Query: 1145 PEHTEKATLWQMLNVEET------IGMSLTTSYAMWPGASVSGWYFSHPDSRYFAVAQIQ 1198
            P+HTEKATL+++L+ E +       G+ LT  YAM+P A+VSGWYF+HP ++YFAV +I 
Sbjct: 1147 PDHTEKATLFRLLDPEASELKAGRSGVFLTEHYAMFPAAAVSGWYFAHPQAQYFAVGKID 1206

Query: 1199 PDQLHSYAERKGWRLEEAEKWLAPNL 1224
             DQ+ SY  RKG  L   E+WLAPNL
Sbjct: 1207 KDQVQSYTARKGQDLSVTERWLAPNL 1232