Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 1230 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase from Pseudomonas stutzeri RCH2

 Score = 1608 bits (4165), Expect = 0.0
 Identities = 808/1222 (66%), Positives = 980/1222 (80%), Gaps = 8/1222 (0%)

Query: 7    QQLEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIK 66
            Q L+Q LK+RIL++DGGMGTMIQSYKL+EEDYRG RF DW  D+KGNNDLL+L++P II+
Sbjct: 9    QALQQALKERILILDGGMGTMIQSYKLEEEDYRGTRFADWPQDVKGNNDLLLLSRPDIIQ 68

Query: 67   EIHSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSR 126
             I  AYL+AGADILETNTFN+T ++ ADY M+ L  E+N   A+LAREVAD  TA+ P R
Sbjct: 69   AIEKAYLDAGADILETNTFNATRVSQADYGMEELVYELNVEGARLAREVADAKTAETPDR 128

Query: 127  PRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFD 186
            PR+VAGVLGPT+RTCSISPDVN+PG+RNVTFD LVE Y E+TR LI+GG+DLILIETIFD
Sbjct: 129  PRFVAGVLGPTSRTCSISPDVNNPGYRNVTFDLLVENYVEATRGLIEGGADLILIETIFD 188

Query: 187  TLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFGL 246
            TLNAKA  FAV  VFE+ G+ LP+MISGTITDASGRTLSGQTTEAF+N++RH +PIS GL
Sbjct: 189  TLNAKAAIFAVQQVFEDEGVELPIMISGTITDASGRTLSGQTTEAFWNSVRHAKPISVGL 248

Query: 247  NCALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQAGFLN 306
            NCALG  +LR Y+EELS  +E +VSAHPNAGLPNAFGEYD S  EMA  + E+A +GFLN
Sbjct: 249  NCALGAKDLRPYLEELSSKAETFVSAHPNAGLPNAFGEYDESPAEMAAVVEEFAASGFLN 308

Query: 307  LVGGCCGTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVGERTNV 366
            ++GGCCGTTP HI AIA+AV    PRA+PD+   CRLSGLEP  I   +LFVNVGERTN+
Sbjct: 309  IIGGCCGTTPAHIQAIAEAVSKYPPRAIPDIPKACRLSGLEPFTIDRSSLFVNVGERTNI 368

Query: 367  TGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEPE 426
            TGSA+F RLI+EE Y EAL+VA +QVE GAQ+IDINMDEGMLD++A MV FLNL A EP+
Sbjct: 369  TGSAKFARLIREENYTEALEVALQQVEAGAQVIDINMDEGMLDSKAAMVTFLNLIAGEPD 428

Query: 427  ISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIVMAF 486
            IS+VP+M+DSSKWEVIEAGLKCIQGKGIVNSIS+KEG E+F  QA L +RYGAAV+VMAF
Sbjct: 429  ISRVPIMIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFKQQAHLCKRYGAAVVVMAF 488

Query: 487  DEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDFINA 546
            DE GQADT  RK EIC+R+Y ILV+EVGFPPEDIIFDPNIFA+ATGI+EHNNYA+DFI A
Sbjct: 489  DEAGQADTAARKREICKRSYDILVNEVGFPPEDIIFDPNIFAIATGIEEHNNYAVDFIEA 548

Query: 547  VADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQLEIY 606
             A I+  LP+A+ SGGVSNVSFSFRGNN VREAIH+VFL+H  K G+ MGIVNAGQLEIY
Sbjct: 549  CAYIRDNLPYALTSGGVSNVSFSFRGNNPVREAIHSVFLFHAIKAGLTMGIVNAGQLEIY 608

Query: 607  DNVPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWPVAKRLEH 666
            D +P +LR+AVEDV+LNR ++GTE LLE+A+ Y+ +  G  ++A   EWR+ PV KRLEH
Sbjct: 609  DEIPKELRDAVEDVVLNRSANGTEGLLELADKYKGD--GSVKEAETEEWRSLPVDKRLEH 666

Query: 667  ALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVM 726
            ALVKGIT FIV+DTEE RQQ  +P+EVIEGPLM GMNVVGDLFG GKMFLPQVVKSARVM
Sbjct: 667  ALVKGITAFIVEDTEECRQQCKRPIEVIEGPLMSGMNVVGDLFGAGKMFLPQVVKSARVM 726

Query: 727  KQAVAYLEPFINAQKSGS-TSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIIDLGVMV 785
            KQAVA+L PFI A+K     + GKIL+ATVKGDVHDIGKNIVGVVL CN ++++D+GVMV
Sbjct: 727  KQAVAHLIPFIEAEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDVVDMGVMV 786

Query: 786  PCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSKAHTAV 845
            P E+IL+ A  +  DIIGLSGLITPSLDEMVHVAKEM+RQGF LPL+IGGATTSKAHTAV
Sbjct: 787  PAEKILQTAIAEKCDIIGLSGLITPSLDEMVHVAKEMQRQGFSLPLMIGGATTSKAHTAV 846

Query: 846  KIEQNYH-APVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQHARKTPKSRP 904
            KI+  YH   VVYV +ASRAVGV T+LLS E +P F+E+   +Y   R++ A ++ ++  
Sbjct: 847  KIDPQYHNDAVVYVTDASRAVGVATTLLSKELKPAFVEKTREEYAMIRERTANRSARTER 906

Query: 905  VTLEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFMTWSLMGKYPA 964
            ++  QA ANK   DWA+YTP  P+  G  + E+I L TL  YIDWTPFF+ W L GKYP 
Sbjct: 907  LSYAQAVANKPQFDWASYTPVKPSFTGRQLLEDIDLRTLAEYIDWTPFFIAWDLAGKYPR 966

Query: 965  ILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASV-GDDIEVYSDESRTQ 1023
            ILE E VGE A  LF DA A+L+K+  E L++A  +   +PA  V  DD+EVY D    +
Sbjct: 967  ILEDEVVGEAATALFSDAQAMLNKLIDEKLIRARAVFGFWPANQVQDDDLEVYGDGG--E 1024

Query: 1024 VAHVLYNLRQQTEKPKG-ANYCLSDYVAPKESGKRDWIGAFAVTGGIGERALADAYKAQG 1082
                L++LRQQ  KP    N  L+D+VAPK+SG  D++G F  T GIG   LA AY+ +G
Sbjct: 1025 KLATLHHLRQQIIKPDAKPNLSLADFVAPKDSGITDYVGGFICTAGIGAEELAKAYQDKG 1084

Query: 1083 DDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQGIRPAPGYP 1142
            DDYN+IM++A+ADRLAEA AE+LH++VRK+ WGYA DE LSN++LIRE+Y+GIRPAPGYP
Sbjct: 1085 DDYNSIMVKALADRLAEACAEWLHQQVRKQYWGYAKDEQLSNEELIREQYKGIRPAPGYP 1144

Query: 1143 ACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVSGWYFSHPDSRYFAVAQIQPDQL 1202
            ACP+HTEK TL+Q+L+ +    ++LT  YAM P A+VSGWYF+HP+++YFAV +I  DQ+
Sbjct: 1145 ACPDHTEKGTLFQLLDADGISQVTLTEHYAMLPTAAVSGWYFAHPEAQYFAVGKIDKDQV 1204

Query: 1203 HSYAERKGWRLEEAEKWLAPNL 1224
             SY++RKG  +  +E+WL PNL
Sbjct: 1205 ESYSQRKGEDIAVSERWLMPNL 1226