Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 1239 a.a., methionine synthase (B12-dependent) from Pseudomonas syringae pv. syringae B728a

 Score = 1581 bits (4093), Expect = 0.0
 Identities = 795/1225 (64%), Positives = 966/1225 (78%), Gaps = 17/1225 (1%)

Query: 13   LKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIKEIHSAY 72
            LKQRIL++DGGMGTMIQSY+L+E+DYRG RF DW  D+KGNNDLL+LT+P +I  I  AY
Sbjct: 15   LKQRILILDGGMGTMIQSYRLEEQDYRGKRFADWPSDVKGNNDLLILTRPDVIGAIEKAY 74

Query: 73   LEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSRPRYVAG 132
            L+AGADILETNTFN+T ++ ADY M+S+  E+N   A+LAR+VAD  T + P RPR+VAG
Sbjct: 75   LDAGADILETNTFNATQVSQADYGMESIVYELNVEGARLARKVADAKTLETPDRPRFVAG 134

Query: 133  VLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFDTLNAKA 192
            VLGPT+RTCS+SPDVN+PG+RNVTFD LVE Y+E+T+ LI+GG+DLILIETIFDTLNAKA
Sbjct: 135  VLGPTSRTCSLSPDVNNPGYRNVTFDELVENYTEATKGLIEGGADLILIETIFDTLNAKA 194

Query: 193  CAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFGLNCALGP 252
              FAV  VFEE+G  LP+MISGTITDASGRTLSGQTTEAF+N++ H +PIS GLNCALG 
Sbjct: 195  AIFAVQGVFEEVGFELPIMISGTITDASGRTLSGQTTEAFWNSISHAKPISVGLNCALGA 254

Query: 253  DELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQAGFLNLVGGCC 312
             ELR Y++EL+  +  +VSAHPNAGLPNAFGEYD    + A+ I E+AQ+GFLN+VGGCC
Sbjct: 255  SELRPYLQELANKANTHVSAHPNAGLPNAFGEYDELPSQTAKIIEEFAQSGFLNIVGGCC 314

Query: 313  GTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVGERTNVTGSARF 372
            GTTP HI AIA+AV G  PR +PD+   CRLSGLEP  I  ++LFVNVGERTN+TGSARF
Sbjct: 315  GTTPAHIKAIAEAVSGYAPREIPDIPKACRLSGLEPFTIDRQSLFVNVGERTNITGSARF 374

Query: 373  KRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEPEISKVPV 432
             RLI+E+ Y EAL+VA +QVE GAQ+IDINMDEGMLD++  MV FLNL A EP+IS+VP+
Sbjct: 375  ARLIREDNYTEALEVALQQVEAGAQVIDINMDEGMLDSKKAMVTFLNLIAGEPDISRVPI 434

Query: 433  MVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIVMAFDEVGQA 492
            M+DSSKWEVIEAGLKCIQGKGIVNSIS+KEG E+FI  A+L +RYGAAV+VMAFDE GQA
Sbjct: 435  MIDSSKWEVIEAGLKCIQGKGIVNSISMKEGVEQFIHHARLCKRYGAAVVVMAFDEQGQA 494

Query: 493  DTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDFINAVADIKR 552
            DT  RK EIC+R+Y ILVDEVGFPPEDIIFDPNIFA+ATGI+EHNNYA+DFINA A I+ 
Sbjct: 495  DTEARKKEICKRSYDILVDEVGFPPEDIIFDPNIFAIATGIEEHNNYAVDFINACAYIRD 554

Query: 553  ELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQLEIYDNVPLK 612
            ELP+A+ SGGVSNVSFSFRGNN VREAIH+VFL H  ++G+ MGIVNAGQLEIYD +P +
Sbjct: 555  ELPYALTSGGVSNVSFSFRGNNPVREAIHSVFLLHAIRNGLSMGIVNAGQLEIYDQIPAE 614

Query: 613  LREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWPVAKRLEHALVKGI 672
            LR+ VEDV+LNR  +GT+ LL IA+ ++ +  G  ++A   EWR+WPV +RLEHALVKGI
Sbjct: 615  LRDCVEDVVLNRNPEGTDALLAIADKFKGD--GSVKEAETEEWRSWPVNQRLEHALVKGI 672

Query: 673  TEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVVKSARVMKQAVAY 732
            T  IVQDTEE+R   ++P+EVIEGPLM GMNVVGDLFG GKMFLPQVVKSARVMKQAVA+
Sbjct: 673  TTHIVQDTEESRVGFARPIEVIEGPLMAGMNVVGDLFGAGKMFLPQVVKSARVMKQAVAH 732

Query: 733  LEPFINAQKSGS-TSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIIDLGVMVPCEQIL 791
            L PFI  +K     + GKIL+ATVKGDVHDIGKNIVGVVL CN ++I+DLGVMVP E+IL
Sbjct: 733  LIPFIELEKGDKPEAKGKILMATVKGDVHDIGKNIVGVVLGCNGYDIVDLGVMVPAEKIL 792

Query: 792  KVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSKAHTAVKIEQNY 851
            +VAR++  DIIGLSGLITPSLDEMVHVA+EM+RQ F LPL+IGGATTSKAHTAVKIE  Y
Sbjct: 793  QVARDEKCDIIGLSGLITPSLDEMVHVAREMQRQDFHLPLMIGGATTSKAHTAVKIEPKY 852

Query: 852  -HAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQHARKTPKSRPVTLEQA 910
             +  V+YV +ASRAVGV T LLS E +P FIE+  L+Y   R++ + ++ ++  ++   A
Sbjct: 853  SNDAVIYVTDASRAVGVATQLLSKELKPAFIEKTRLEYVEVRERTSARSARTERLSYGAA 912

Query: 911  RANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPFFMTWSLMGKYPAILEHEE 970
             A K   DW NYTP  P   G  V ++I L  L  YIDWTPFF++W L GKYP IL  E 
Sbjct: 913  VAKKPQFDWENYTPAQPTFTGTRVLQDIDLNVLAEYIDWTPFFISWDLAGKYPRILTDEV 972

Query: 971  VGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASVG-DDIEVYSDESRTQVAHVLY 1029
            VGE A  L+ DA  +L K+  E L+ A  +   +PA  V  DD+EVY D+ +      L+
Sbjct: 973  VGEAATALYADATQMLRKLIDEKLISARAVFGFWPANQVNDDDLEVYDDDGKPLAK--LH 1030

Query: 1030 NLRQQTEKPKG-ANYCLSDYVAPKESGKRDWIGAFAVTGGIGERALADAYKAQGDDYNAI 1088
            +LRQQT KP G  N+ L+D+VAPK+SG  D+IG F  T GIG   +A AY+ +GDDYN+I
Sbjct: 1031 HLRQQTIKPDGKPNFSLADFVAPKDSGLTDYIGGFITTAGIGAEEVAKAYQDKGDDYNSI 1090

Query: 1089 MIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRERYQGIRPAPGYPACPEHT 1148
            M++A+ADRLAEA AE+LH++VRKE WGYA DE L N+ LI+E+Y GIRPAPGYPACP+HT
Sbjct: 1091 MVKALADRLAEACAEWLHQQVRKEYWGYAQDEALDNEALIKEQYMGIRPAPGYPACPDHT 1150

Query: 1149 EKATLWQML------NVEETIGMS---LTTSYAMWPGASVSGWYFSHPDSRYFAVAQIQP 1199
            EK TL+ +L      + E T G S   LT  YAM+P A+VSGWYF+HP ++YFAV +I  
Sbjct: 1151 EKGTLFALLDPLPEGSAEHTAGKSGVFLTEHYAMFPAAAVSGWYFAHPQAQYFAVGKIDK 1210

Query: 1200 DQLHSYAERKGWRLEEAEKWLAPNL 1224
            DQ+ SY  RKG  L   E+WLAPNL
Sbjct: 1211 DQVESYTARKGQDLSVTERWLAPNL 1235