Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 1195 a.a., methionine synthase from Synechocystis sp000284455 PCC 6803

 Score =  572 bits (1474), Expect = e-167
 Identities = 395/1230 (32%), Positives = 636/1230 (51%), Gaps = 104/1230 (8%)

Query: 17   ILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIKEIHSAYLEAG 76
            +L+ DG MGT +Q   L   D+ GA +       +G N+ LV T+P+ +  +H A+ EAG
Sbjct: 16   VLVFDGAMGTNLQVQNLTAADFGGAEY-------EGCNEYLVHTKPEAVATVHRAFYEAG 68

Query: 77   ADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSRPRYVAGVLGP 136
            AD++ET+TF  T + +A+YD+   S  +N AAA+LA+ VA E++   P +PR+VAG +GP
Sbjct: 69   ADVVETDTFGGTPLVLAEYDLADQSYYLNKAAAELAKAVAAEFST--PEKPRFVAGSMGP 126

Query: 137  TNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFDTLNAKACAFA 196
              +          P   +V +D L +AY    R L  GG DL+L+ET  D L  KA   A
Sbjct: 127  GTKL---------PTLGHVDYDSLKDAYVVQVRGLYDGGVDLLLVETCQDVLQIKAALNA 177

Query: 197  VDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISF-GLNCALGPDEL 255
            ++ VF E G  LP+M+S T+ +  G  L G T  A   A+    PI   GLNCA GPD +
Sbjct: 178  IEQVFAEKGDRLPLMVSVTM-ETMGTMLVG-TEMAAALAILEPYPIDILGLNCATGPDLM 235

Query: 256  RQYVEELSRISECYVSAHPNAGLPNAFGE---YDLSAEEMAEHIAEWAQAGFLNLVGGCC 312
            +++V+ LS  S   VS  PNAGLP   G    Y L+  E+   +  + +   + ++GGCC
Sbjct: 236  KEHVKYLSEHSPFVVSCIPNAGLPENVGGQAFYRLTPMELQMSLMHFIEDLGVQVIGGCC 295

Query: 313  GTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVGERTNVTGSARF 372
            GT P+HI A+A   + ++P+           S         E  F+ +GER N +GS + 
Sbjct: 296  GTRPDHIKALADIAKDLQPKQRQPHYEPSAASIYSTQTYAQENSFLIIGERLNASGSKKC 355

Query: 373  KRLIKEEQYDEALDVAREQVENGAQIIDINMD----EGMLDAEACMVRFLNLCASEPEIS 428
            + L+  E +D  + +A+ QV+ GAQI+D+N+D    +G+ D +    R +N         
Sbjct: 356  RDLLNAEDWDSLVSLAKSQVKEGAQILDVNVDYVGRDGVRDMKELASRLVNNVT------ 409

Query: 429  KVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIVMAFDE 488
             +P+M+DS++W+ +EAGLK   GK I+NS + ++G+E+F    ++ + YGA +++   DE
Sbjct: 410  -LPLMLDSTEWQKMEAGLKVAGGKCILNSTNYEDGEERFYKVLEIAKEYGAGIVIGTIDE 468

Query: 489  VGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDFINAVA 548
             G   T ++K EI +RAY   +   G P  +I FDP    ++TGI+E        ++A+ 
Sbjct: 469  DGMGRTADKKFEIAKRAYEAAI-AFGIPATEIFFDPLALPISTGIEEDRENGKATVDAIR 527

Query: 549  DIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQLEIYDN 608
             I++ELP   I  GVSNVSF    N   R+ ++++FL+ C + GMD  IV+A ++     
Sbjct: 528  RIRQELPDCHILLGVSNVSFGL--NPAARQVLNSIFLHECMQVGMDAAIVSANKILPLAK 585

Query: 609  VPLKLREAVEDVILNRRSDGTER-----LLEIAEAYRENSVGKEEDASALEWRAWPVAKR 663
            +  + ++   D+I +RR    ER     L ++   +   +  +++   A      PV +R
Sbjct: 586  IDPEQQQVCLDLIYDRREFEGERCTYDPLTKLTTLFEGKTTKRDKSGDA----NLPVEER 641

Query: 664  LEHALVKGITEFIVQDTEEARQQASK---PLEVIEGPLMDGMNVVGDLFGEGKMFLPQVV 720
            L+  ++ G    +    EEA  +A K   PL++I   L+DGM VVG+LFG G+M LP V+
Sbjct: 642  LKRHIIDGERLGL----EEALNEALKLYAPLDIINIYLLDGMKVVGELFGSGQMQLPFVL 697

Query: 721  KSARVMKQAVAYLEPFINAQKSGSTSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIID 780
            +SA+ MK AVA+LEP ++   S   + G  L+ATVKGDVHDIGKN+V ++L  N + +++
Sbjct: 698  QSAQTMKAAVAFLEPHMDKDDSADNAKGTFLIATVKGDVHDIGKNLVDIILSNNGYRVVN 757

Query: 781  LGVMVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSK 840
            LG+  P E I++  ++   D I +SGL+  S   M    +   ++G  +P+++GGA  + 
Sbjct: 758  LGIKQPVENIIEAYKKHRPDCIAMSGLLVKSTAFMKENLEVFNQEGITVPVILGGAALTP 817

Query: 841  AHTAVKIEQNYHAPVVYVNNASRAVGVCTSLLSDEQR------PGFIERLDLD--YERTR 892
                   +  Y   V+Y  +A   +     L+  +         GF+     +  +  T 
Sbjct: 818  KFVHQDCQNTYKGQVIYGKDAFADLHFMDKLMPAKNSHNWDDFQGFLGEYATENGHNVTT 877

Query: 893  DQHAR------------KTPKSR-PVTLEQARANKAALDWANYTPPAPAKPGVHVFE--N 937
            D  A+             + +SR P  ++  R+     D      P P   G  + +  +
Sbjct: 878  DDGAKTNFGIEEEKLIDASEQSREPEVIDTVRSEAVDPDLER---PVPPFWGTKILQSSD 934

Query: 938  IALATLRPYIDWTPFFM-TWSLMGKYPAILEHEEVGEEAKRLFHDANA-LLDKVEREGLL 995
            I+L  + P +D    F+  W    + P     EE  +      H   A    KV  E LL
Sbjct: 935  ISLDEVFPLLDLQALFVGQWQF--RKPREQSREEYEQFLAEKVHPILAEWKGKVMAENLL 992

Query: 996  KASGMCALFPAASVGDDIEVYSDESRTQ---------VAHVLYNLRQQTEKPKGANYCLS 1046
              + +   FP  S G+ + +Y  E  +Q          A   +   +Q     G   C++
Sbjct: 993  HPTVVYGYFPCQSQGNTLLIYDPELVSQNNGQIPPDATAIAKFEFPRQ---KSGRRLCIA 1049

Query: 1047 DYVAPKESGKRDWIGAFAVTGGIGERALADAYKA-QGDDY-NAIMIQAVADRLAEAFAEY 1104
            D+ A KESG  D     AVT  +GE A   A K   GD+Y + +    +A ++AEA AE+
Sbjct: 1050 DFFASKESGITDVFPLQAVT--VGEIATEYARKLFAGDNYTDYLYFHGMAVQMAEALAEW 1107

Query: 1105 LHEKVRKEI-WGYASDENLSNDDLIRERYQGIRPAPGYPACPEHTEKATLWQMLNVEETI 1163
             H+++R+E+ +G+   +N+   DL+++RYQG R + GYPACP   ++ T  ++L  E  I
Sbjct: 1108 THQRIRQELGFGHLDPDNIR--DLLQQRYQGSRYSFGYPACPNMQDQYTQLELLQTER-I 1164

Query: 1164 GMSLTTSYAMWPGASVSGWYFSHPDSRYFA 1193
            G+ +  S  ++P  S +     HP ++YF+
Sbjct: 1165 GLYMDESEQVYPEQSTTAIISYHPAAKYFS 1194