Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 1257 a.a., B12-dependent methionine synthase from Sinorhizobium meliloti 1021

 Score = 1463 bits (3788), Expect = 0.0
 Identities = 751/1234 (60%), Positives = 912/1234 (73%), Gaps = 14/1234 (1%)

Query: 2    GKEVRQQLEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQ 61
            G EV +QL Q   +RIL++DG MGT IQ     E+ +RG RF    C  +GNNDLL LTQ
Sbjct: 17   GSEVFRQLAQAAAERILIMDGAMGTEIQQLGFVEDHFRGERFGGCACHQQGNNDLLTLTQ 76

Query: 62   PQIIKEIHSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTA 121
            P+ I++IH  Y  AGADILETNTF+ST IA ADY M+ +  ++N   A+LAR  A    A
Sbjct: 77   PKAIEDIHYHYAIAGADILETNTFSSTRIAQADYGMEDMVYDLNRDGARLARRAAKRAEA 136

Query: 122  KDPSRPRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILI 181
            +D  R R+VAG LGPTNRT SISPDVN+PG+R V+FD L  AY+E  R LI GG+D+ILI
Sbjct: 137  ED-GRRRFVAGALGPTNRTASISPDVNNPGYRAVSFDDLRLAYAEQVRGLIDGGADIILI 195

Query: 182  ETIFDTLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRP 241
            ETIFDTLNAKA  FA   VF E G+ LPVMISGTITD SGRTLSGQT  AF+ ++RH  P
Sbjct: 196  ETIFDTLNAKAAIFATQEVFAEKGVRLPVMISGTITDLSGRTLSGQTPTAFWYSVRHADP 255

Query: 242  ISFGLNCALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQ 301
             + GLNCALG + +R +++ELS +++  V A+PNAGLPN FG YD S E+MA  +  +A+
Sbjct: 256  FTIGLNCALGANAMRAHIDELSAVADTLVCAYPNAGLPNEFGRYDESPEQMAAQVEGFAR 315

Query: 302  AGFLNLVGGCCGTTPEHIAAIAKAVEGVKPRALPDLKVECRLSGLEPLNIGPETLFVNVG 361
             G +N+VGGCCG+TP HI AIA+AV    PR +P++    RLSGLEP  +  E  FVNVG
Sbjct: 316  DGLVNIVGGCCGSTPAHIRAIAEAVAKYPPRRVPEIDRRMRLSGLEPFTLTDEIPFVNVG 375

Query: 362  ERTNVTGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLC 421
            ERTNVTGSA+F++LI    Y  ALDVAR+QV NGAQIID+NMDEG++D++  MV FLNL 
Sbjct: 376  ERTNVTGSAKFRKLITAGDYAAALDVARDQVANGAQIIDVNMDEGLIDSKQVMVEFLNLV 435

Query: 422  ASEPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAV 481
            ASEP+I++VPVM+DSSKWEVIEAGLKC+QGK +VNSISLKEG+  F+  A+LVR YGAAV
Sbjct: 436  ASEPDIARVPVMIDSSKWEVIEAGLKCVQGKALVNSISLKEGEAAFLHHARLVRAYGAAV 495

Query: 482  IVMAFDEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYAL 541
            +VMAFDE GQADT+ RK+EICRRAY +L +EVGFPPEDIIFDPNIFAVATGI+EHNNY +
Sbjct: 496  VVMAFDEKGQADTKTRKVEICRRAYRLLTEEVGFPPEDIIFDPNIFAVATGIEEHNNYGV 555

Query: 542  DFINAVADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAG 601
            DFI A  +I   LPH  +SGGVSN+SFSFRGN  VREA+HA+FLYH  + GMDMGIVNAG
Sbjct: 556  DFIEATHEIIAALPHVHVSGGVSNLSFSFRGNEPVREAMHAIFLYHAIQAGMDMGIVNAG 615

Query: 602  QLEIYDNVPLKLREAVEDVILNRRSDGTERLLEIAEAYR--ENSVGKEEDASALEWRAWP 659
            QL +YD +  +LRE  EDV+LNRR+D TERLLEIAE YR    S GKE+D   L WR WP
Sbjct: 616  QLAVYDAIDPELRETCEDVVLNRRADSTERLLEIAERYRGKGGSQGKEKD---LAWREWP 672

Query: 660  VAKRLEHALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQV 719
            V KRLEHALV GITEFI  DTEEAR  A +PL VIEGPLM GMNVVGDLFG GKMFLPQV
Sbjct: 673  VEKRLEHALVNGITEFIEADTEEARLAAERPLHVIEGPLMAGMNVVGDLFGSGKMFLPQV 732

Query: 720  VKSARVMKQAVAYLEPFINAQKSGS------TSNGKILLATVKGDVHDIGKNIVGVVLQC 773
            VKSARVMKQAVA L P +  +K  +       S GKIL+ATVKGDVHDIGKNIVGVVL C
Sbjct: 733  VKSARVMKQAVAVLLPHMEEEKRANGGGEARESAGKILMATVKGDVHDIGKNIVGVVLAC 792

Query: 774  NNFEIIDLGVMVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLI 833
            NN+EIIDLGVMVP  +IL+VAREQ VDI+GLSGLITPSLDEM HVA E+ER+GF++PLLI
Sbjct: 793  NNYEIIDLGVMVPSAKILEVAREQKVDIVGLSGLITPSLDEMAHVASELEREGFDVPLLI 852

Query: 834  GGATTSKAHTAVKIEQNYH-APVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTR 892
            GGATTS+ HTAVKI   Y     VYV +ASRAVGV +SLLS E R  + + +  +Y +  
Sbjct: 853  GGATTSRVHTAVKINPRYSLGQTVYVTDASRAVGVVSSLLSPEVRDSYKKTVRAEYLKVA 912

Query: 893  DQHARKTPKSRPVTLEQARANKAALDWANYTPPAPAKPGVHVFENIALATLRPYIDWTPF 952
            D HAR   + R + L QARAN   +DW  + P  P+  G  VFE   LA L  YIDWTPF
Sbjct: 913  DAHARNEAEKRRLPLSQARANAFRIDWDAHQPKVPSFLGTRVFEGWDLAELARYIDWTPF 972

Query: 953  FMTWSLMGKYPAILEHEEVGEEAKRLFHDANALLDKVEREGLLKASGMCALFPAASVGDD 1012
            F TW L G +P IL+ E  G  A++LF DA A+++K+  E       +   +PAAS+GDD
Sbjct: 973  FQTWELKGVFPKILDDERQGAAARQLFEDAQAMVEKIVAEAWFAPKAVIGFWPAASMGDD 1032

Query: 1013 IEVYSDESRTQVAHVLYNLRQQTEKPKG-ANYCLSDYVAPKESGKRDWIGAFAVTGGIGE 1071
            + +++DE R       + LRQQ  K  G  N  L+D+VAP  SGKRD++G F VT GI E
Sbjct: 1033 VRLFADEVREAELATFFTLRQQMVKRDGRPNVALADFVAPAASGKRDYVGGFVVTAGIEE 1092

Query: 1072 RALADAYKAQGDDYNAIMIQAVADRLAEAFAEYLHEKVRKEIWGYASDENLSNDDLIRER 1131
             A+A+ ++   DDY++IM++A+ADR AEAFAE +HE VRKE+WGYA DE  +  +LI E 
Sbjct: 1093 VAIAERFERANDDYSSIMVKALADRFAEAFAERMHEYVRKELWGYAPDEAFTPQELIAEP 1152

Query: 1132 YQGIRPAPGYPACPEHTEKATLWQMLNVEETIGMSLTTSYAMWPGASVSGWYFSHPDSRY 1191
            Y GIRPAPGYPA P+HTEK TL+++L+ E  IG+ LT SYAMWPG+SVSG Y  HPDS Y
Sbjct: 1153 YAGIRPAPGYPAQPDHTEKETLFRLLDAEAAIGVRLTESYAMWPGSSVSGLYVGHPDSYY 1212

Query: 1192 FAVAQIQPDQLHSYAERKGWRLEEAEKWLAPNLD 1225
            F VA+I+ DQ+  YA+RK   + E E+WL+P L+
Sbjct: 1213 FGVAKIERDQVEDYADRKRMSVREVERWLSPILN 1246