Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 1182 a.a., 5-methyltetrahydrofolate--homocysteine methyltransferase (NCBI) from Rhodospirillum rubrum S1H

 Score =  552 bits (1423), Expect = e-161
 Identities = 389/1223 (31%), Positives = 614/1223 (50%), Gaps = 89/1223 (7%)

Query: 13   LKQRILLIDGGMGTMIQSYKLQEE-DYRGARFVDWHCDLKGNNDLLVLTQPQIIKEIHSA 71
            L+ R+LL DGGMG+++Q+  L  + D+ G      +C      ++L L++P ++++IH+ 
Sbjct: 8    LRNRVLLCDGGMGSLVQAMDLSVDGDFMGRE----NC-----TEVLNLSRPDVVRDIHTR 58

Query: 72   YLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDPSRPRYVA 131
            Y  AGAD +ETNTF  +T+ +A++D+   + EIN  AA++ARE A+ +      R R+V 
Sbjct: 59   YFAAGADCVETNTFGGSTLTLAEFDLADRTREINRRAAEIAREAAESFA---DGRDRFVL 115

Query: 132  GVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFDTLNAK 191
            G +GP  +          P   ++ +D L +A +     LI+GG+D IL+ET  D L  K
Sbjct: 116  GSIGPGTKL---------PSLGHIDYDTLKDAITVQCEGLIEGGADAILVETCQDPLQFK 166

Query: 192  ACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFGLNCALG 251
            A   A  +    LG    +++  T+ + +G  L G    A       +   S GLNCA G
Sbjct: 167  AAINAAKAARLALGSDTAILLQVTV-ETTGTLLVGADIAAAATVAHALGVDSLGLNCATG 225

Query: 252  PDELRQYVEELSRISECYVSAHPNAGLPNAFG---EYDLSAEEMAEHIAEWAQAGFLNLV 308
            P E+ ++V  L       +S  PNAGLP        Y L+  E+A+    + +   +NL+
Sbjct: 226  PQEMSEHVRWLKENWPGLISLQPNAGLPELLDGKTHYPLTPAELADWHGRFIREDGVNLI 285

Query: 309  GGCCGTTPEHIAAIAKAVE----GVKP----RALPDLKVECRLSGLEPLNIGPETLFVNV 360
            GGCCGTTP+HIAA+   +E    G +P    R++  +     L G  P+    E  F+++
Sbjct: 286  GGCCGTTPDHIAAVNAMLETLGQGRRPAPVKRSVHWVPSVASLYGAVPMR--QENAFLSI 343

Query: 361  GERTNVTGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNL 420
            GER N  GS +F+     E +D  + +AREQV+ G+  +D+          A M   ++ 
Sbjct: 344  GERCNANGSKKFRTFQDNEDWDAIVGMAREQVKEGSHTLDVCTAFVGRKEGADMTEVVSR 403

Query: 421  CASEPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAA 480
                      P+++DS++  V+   LK   GK I+NSI+ ++G+E    +  L R +GAA
Sbjct: 404  LRGGVN---APLVIDSTETPVLTQALKLYGGKAIINSINFEDGEESAAQRLALAREFGAA 460

Query: 481  VIVMAFDEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYA 540
            VI +  DE G A   E KL I  R Y   V + G P  D++FDP  F + TG  +     
Sbjct: 461  VIALTIDEEGMAKDAEAKLRIAHRLYDFAVTQHGLPASDLMFDPLTFTICTGNTDDRRLG 520

Query: 541  LDFINAVADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNA 600
            L+ ++A+  I+ ELP   I  G+SN+SF  +     R  +++VFL    + GM   IV+ 
Sbjct: 521  LETLDAIRRIRTELPECQIILGLSNISFGLK--PVARHVLNSVFLDKAVEAGMTGAIVHI 578

Query: 601  GQLEIYDNVPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRAWPV 660
             ++     +P    +A ED+I +RR+ G + L      + + S     +      RA  V
Sbjct: 579  SKILPLHKIPADEVKAAEDLIFDRRAPGYDPLHAFIALFEDRS-----ETKVAVKRAETV 633

Query: 661  AKRLEHALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVV 720
             +RL+  +V G    +  D  EA  +   PLE+I   L+DGM VVG+LFG GKM LP V+
Sbjct: 634  EERLKQRIVDGDRLGLDADLTEAMGK-YPPLEIINSLLLDGMKVVGELFGAGKMQLPFVL 692

Query: 721  KSARVMKQAVAYLEPFINAQKSGSTSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIID 780
            +SA  MK AVA+LEP  + +K      G I+LATVKGDVHDIGKN+V ++L  N +++I+
Sbjct: 693  QSAETMKAAVAFLEP--HMEKIEGQEKGIIVLATVKGDVHDIGKNLVDIILSNNGYKVIN 750

Query: 781  LGVMVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSK 840
            +G+  P   IL  ARE   D IG+SGL+  S   M    +EM R+G+  P+L+GGA  ++
Sbjct: 751  IGIKQPIAAILASARENRADAIGMSGLLVKSTVIMKDNLEEMAREGWNTPVLLGGAALTR 810

Query: 841  AHTAVKIEQNY--HAPVVYVNNASRAVGVCTSLLS----------DEQRPGFIER----- 883
            A         Y     V Y  +A   + +   +             ++R G   R     
Sbjct: 811  AFVEEDCVSAYAGSGRVAYARDAFDGLDLMAKVAEGRFDTHLSAVQQKRAGRPSRRPKAP 870

Query: 884  --------LDLDYERTRDQHARKTPK--SRPVTLEQARANKAALDWANYTPPAPAKPGVH 933
                          RT D       K   RPV  E+    +A L   ++  P P   G  
Sbjct: 871  PLWPANDPSSKIAPRTLDDQDTAIHKISERPVDAEEILLRRAELA-RDHVVPTPPFWGAK 929

Query: 934  VFENIALATLRPYI-DWTPFFMTWSLMGKYPAILEHEE-VGEEAKRLFHDANALLDKVER 991
            V E+I+L +L PYI + T F   W          E ++    E + +  D   +L    +
Sbjct: 930  VLESISLKSLVPYINEATLFQFQWGFRKGGRTREEWKDWAASEIRPIMFD---MLKTCAQ 986

Query: 992  EGLLKASGMCALFPAASVGDDIEVYSDESRTQVAHVLYNLRQQTEKPKGANYCLSDYVAP 1051
            E +LK   +   + AAS GD I +++++  T+V    ++L +QT +      CL+D+V  
Sbjct: 987  EEILKPRAVYGFWKAASQGDAIVLFAEDGTTEVGR--FDLPRQTIE---GGICLADFVRD 1041

Query: 1052 KESGKRDWIGAFAVTGGIGERALADAYKAQGDDYNAIMIQAVADRLAEAFAEYLHEKVRK 1111
             +SG+RD I   AVT G     +   + A     + + +  ++  +AEA AEY+H+++R 
Sbjct: 1042 IDSGERDVIALQAVTVGARASDVCRDWFAANRYKDYLYLHGISVEVAEAMAEYVHKRIRA 1101

Query: 1112 EIWGYASDENLSNDDLIRERYQGIRPAPGYPACPEHTEKATLWQMLNVEETIGMSLTTSY 1171
            E+ G+A++E    + +I++ Y+G R + GYPACP   ++  L  +L  E  I + L+   
Sbjct: 1102 EL-GFAAEEARDIERMIKQEYRGSRYSFGYPACPNLGDQRQLLDLLGAER-IELDLSDED 1159

Query: 1172 AMWPGASVSGWYFSHPDSRYFAV 1194
             + P  S S     HP ++YF +
Sbjct: 1160 ELVPEQSTSALVLLHPQAKYFRI 1182