Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 804 a.a., Methionine synthase (cobalamin-dependent) (EC 2.1.1.13) (from data) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  312 bits (800), Expect = 6e-89
 Identities = 263/876 (30%), Positives = 409/876 (46%), Gaps = 102/876 (11%)

Query: 16  RILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQIIKEIHSAYLEA 75
           R LL DGG+GTM+Q+  L                   + +   L +P +++ IH+ Y+ A
Sbjct: 12  RRLLFDGGLGTMLQARGLPAGV---------------SPEQFCLDRPDVLRGIHADYVRA 56

Query: 76  GADILETNTFNSTTIAMAD-YDMQSLSAEINFAAAKLAREVADEWTAKDPSRPRYVAGVL 134
           GADIL TNTF  +   + D +D+     + N   A +ARE AD        R  +VAG +
Sbjct: 57  GADILTTNTFGGSRFKLGDGFDV----VDFNRRMAAIAREAADA-----SGRQAFVAGSI 107

Query: 135 GPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETIFDTLNAKACA 194
           GPT        +V            LV A+ E  R L+ GG+DL++IET FD   A+A  
Sbjct: 108 GPTGHFVKPLGEVEPAA--------LVAAFREQVRGLVAGGADLLMIETQFDLAEARAAV 159

Query: 195 FAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISFGLNCALGPDE 254
            A  +       SLP+ +S  +T  +G +L+G T E F   + ++     G NC+ GPD+
Sbjct: 160 VAARAE-----CSLPIAVS--MTFENGVSLTGSTPEVFVATMLNLGVDLLGTNCSAGPDQ 212

Query: 255 LRQYVEELSRISECYVSAHPNAGLPNAFGE---YDLSAEEMAEHIAEWAQAGFLNLVGGC 311
           +   V  L   +   V   PNAGLP        + L     AE  A +A  G   ++GGC
Sbjct: 213 MHDVVASLLASASVPVLVEPNAGLPELIDGKTVFRLPPAPFAEKTAAFAAMG-ARVLGGC 271

Query: 312 CGTTPEHIAAIAKAVEGVKPRALP-DLKVECRLSGLEPL-NIGPETLFVNVGERTNVTGS 369
           CGTTP+HIAA+ +AV  + P  LP D  V   L+    L  +G +     +GER N TG 
Sbjct: 272 CGTTPDHIAALRQAVADI-PATLPVDSGVGIVLTTRSHLVRVGGDAPVRIIGERINPTGK 330

Query: 370 ARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCASEPEISK 429
            +    ++   +  AL  + EQVE GA I+D+N+   M+D E  +   +    +      
Sbjct: 331 KQLIAELQAGDFSLALRFSDEQVEAGAPILDVNVGAPMVDEEVLLPDLVQRLITR---HG 387

Query: 430 VPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIVMAFDEV 489
           VP+ +DSS    IE  L    G  +VNSIS + G+ + +    L R +GA  I++     
Sbjct: 388 VPLSIDSSNAAAIERALPYCPGSTLVNSISGEPGRMERLGP--LCRDHGAPFILLPL--- 442

Query: 490 GQADTRERKLEICRRAYHILVDEV-------GFPPEDIIFDPNIFAVATGIDEHNNYALD 542
                + RKL +       +++E+       G P   ++ D    AV++  +        
Sbjct: 443 -----KGRKLPVAATERIAIIEELLVQAEGLGIPRRLVMVDVLALAVSSKAE-------- 489

Query: 543 FINAVADIKRELPHAMISG-----GVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGI 597
              A       +     +G     G+SN+SF        RE ++  FL      G+   I
Sbjct: 490 ---AARQCLETIRWCTANGFATTIGLSNISFGLPA----RELLNGTFLAMAAGAGLSSCI 542

Query: 598 VNAGQLEIYDNVPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALEWRA 657
            + G   I + V      A  DV+L R ++  ER ++   A+   + G    AS     +
Sbjct: 543 AHPGNGRIRETV------ACADVLLARDANA-ERFIDAYAAWTPATQGGPV-ASGPGLAS 594

Query: 658 WPVAKRLEHALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLP 717
            P A  LE A+VKG  + +    E      + P ++++  L+  +N VG  +   + FLP
Sbjct: 595 QPPATTLEEAVVKGDRDGVTAIVESELAAGADPFDLVQTKLIPAINEVGVKYERREYFLP 654

Query: 718 QVVKSARVMKQAVAYLEPFINAQKSGSTSNGKILLATVKGDVHDIGKNIVGVVLQCNNFE 777
           Q+++SA  M+ A   L+P +   + G+     I++ATV+GD+HDIGKNIV ++L  + FE
Sbjct: 655 QLIRSAETMQTAFRRLQPLLEEMR-GAEVRPVIIMATVEGDIHDIGKNIVSLMLGNHGFE 713

Query: 778 IIDLGVMVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGAT 837
           ++DLG  V  E I+  A      IIGLS L+T ++  M    K +  +G ++ +++GGA 
Sbjct: 714 VVDLGKDVKAETIVDAAETHGARIIGLSALMTTTMVRMEDTVKLVRARGLDVKVIVGGAV 773

Query: 838 TSKAHTAVKIEQNYHAPVVYVNNASRAVGVCTSLLS 873
            +KA         Y A      +A  AV +  SLL+
Sbjct: 774 VTKAFADAIGADGYSA------DAVEAVRLAKSLLA 803