Pairwise Alignments

Query, 1226 a.a., methionine synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 915 a.a., 5-methyltetrahydrofolate-homocysteine methyltransferase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 1060 bits (2740), Expect = 0.0
 Identities = 525/917 (57%), Positives = 689/917 (75%), Gaps = 7/917 (0%)

Query: 5   VRQQLEQQLKQRILLIDGGMGTMIQSYKLQEEDYRGARFVDWHCDLKGNNDLLVLTQPQI 64
           +++ + Q + +RIL++DG MGTMIQ Y L+EED+RG RF      LKGNNDLL LT+P +
Sbjct: 1   MKKTISQIVSERILILDGAMGTMIQQYNLKEEDFRGERFAHIPGQLKGNNDLLCLTRPDV 60

Query: 65  IKEIHSAYLEAGADILETNTFNSTTIAMADYDMQSLSAEINFAAAKLAREVADEWTAKDP 124
           I++IH  YLEAGADI+ETNTF+STT++MADY ++    EIN AA +LARE+ADE+TAK P
Sbjct: 61  IQDIHRKYLEAGADIIETNTFSSTTVSMADYHVEEYVREINLAATRLARELADEYTAKSP 120

Query: 125 SRPRYVAGVLGPTNRTCSISPDVNDPGFRNVTFDGLVEAYSESTRALIKGGSDLILIETI 184
            +PR+VAG +GPTN+TCS+SPDVN+P FR +++D L  +Y +   A+++GG D ILIETI
Sbjct: 121 DKPRFVAGSVGPTNKTCSMSPDVNNPAFRALSYDELAASYQQQMEAMLEGGVDAILIETI 180

Query: 185 FDTLNAKACAFAVDSVFEELGISLPVMISGTITDASGRTLSGQTTEAFYNALRHVRPISF 244
           FDTLNAKA  FA     +  GI +PVM+S T++D  GRTLSGQT EAF  +++H    S 
Sbjct: 181 FDTLNAKAAIFAAGQAMKVTGIEVPVMLSVTVSDIGGRTLSGQTLEAFLASVQHANIFSV 240

Query: 245 GLNCALGPDELRQYVEELSRISECYVSAHPNAGLPNAFGEYDLSAEEMAEHIAEWAQAGF 304
           GLNC+ G  +L+ ++E+L+  +  Y+SA+PNAGLPN+ G+YD +  +MA  + E+ Q G 
Sbjct: 241 GLNCSFGARQLKPFLEQLASRAPYYISAYPNAGLPNSLGKYDQTPADMAHEVKEYIQEGL 300

Query: 305 LNLVGGCCGTTPEHIAAIAKAVEGVKPRALPDLKVECR-LSGLEPLNIGPETLFVNVGER 363
           +N++GGCCGTT  +IA     + G KP  +P  K +C  LSGLE L + PE  FVN+GER
Sbjct: 301 VNIIGGCCGTTDAYIAEYQTLIAGAKPH-VPAPKPDCMWLSGLELLEVKPEINFVNIGER 359

Query: 364 TNVTGSARFKRLIKEEQYDEALDVAREQVENGAQIIDINMDEGMLDAEACMVRFLNLCAS 423
            NV GS +F RL+ E++YDEAL +AR+QVE+GA +ID+NMD+G+LDA   M  FLNL  S
Sbjct: 360 CNVAGSRKFLRLVNEKKYDEALSIARQQVEDGALVIDVNMDDGLLDARTEMTTFLNLIMS 419

Query: 424 EPEISKVPVMVDSSKWEVIEAGLKCIQGKGIVNSISLKEGKEKFIAQAKLVRRYGAAVIV 483
           EPEI++VPVM+DSSKWEVIEAGLKC+QGK IVNSISLKEG+E F+  A+++++YGAA +V
Sbjct: 420 EPEIARVPVMIDSSKWEVIEAGLKCLQGKSIVNSISLKEGEEVFLEHARIIKQYGAATVV 479

Query: 484 MAFDEVGQADTRERKLEICRRAYHILVDEVGFPPEDIIFDPNIFAVATGIDEHNNYALDF 543
           MAFDE GQADT  RK+E+C RAY +LVD+VGF P DIIFDPN+ AVATGI+EHNNYA+DF
Sbjct: 480 MAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVATGIEEHNNYAVDF 539

Query: 544 INAVADIKRELPHAMISGGVSNVSFSFRGNNYVREAIHAVFLYHCFKHGMDMGIVNAGQL 603
           I A   I++ LP A +SGGVSN+SFSFRGNNY+REA+HAVFLYH  + GMDMGIVN G  
Sbjct: 540 IEATGWIRKNLPGAHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAIQQGMDMGIVNPGTS 599

Query: 604 EIYDNVPLKLREAVEDVILNRRSDGTERLLEIAEAYRENSVGKEEDASALE--WRAWPVA 661
            +Y ++P    E +EDV+LNRR D  ERL+E+AEA +E   G    A+  +  WR   V 
Sbjct: 600 VLYSDIPADTLEKIEDVVLNRRPDAAERLIELAEALKETMGGTSGQAAVKQDAWREESVQ 659

Query: 662 KRLEHALVKGITEFIVQDTEEARQQASKPLEVIEGPLMDGMNVVGDLFGEGKMFLPQVVK 721
           +RL++AL+KGI +++ QD  EA     K ++VIEGPLMDGMN VG+LFG GKMFLPQVVK
Sbjct: 660 ERLKYALMKGIGDYLEQDLAEALPLYDKAVDVIEGPLMDGMNYVGELFGAGKMFLPQVVK 719

Query: 722 SARVMKQAVAYLEPFINAQK-SGSTSNGKILLATVKGDVHDIGKNIVGVVLQCNNFEIID 780
           +AR MK+AVA L+P I ++K  GS+S GK+LLATVKGDVHDIGKNIV VV+ CN ++I+D
Sbjct: 720 TARTMKKAVAILQPIIESEKVEGSSSAGKVLLATVKGDVHDIGKNIVAVVMACNGYDIVD 779

Query: 781 LGVMVPCEQILKVAREQNVDIIGLSGLITPSLDEMVHVAKEMERQGFELPLLIGGATTSK 840
           LGVMVP E I++ A E+ VD+IGLSGLITPSL+EM HVA E+E+ G ++PLLIGGATTSK
Sbjct: 780 LGVMVPAETIVQRAIEEKVDMIGLSGLITPSLEEMTHVAAELEKAGLDIPLLIGGATTSK 839

Query: 841 AHTAVKIEQNYHAPVVYVNNASRAVGVCTSLLSDEQRPGFIERLDLDYERTRDQHARKTP 900
            HTA+KI   YHAPVV++ +AS+   V + LL+ + +   I  LD +Y+  R++      
Sbjct: 840 MHTALKIAPVYHAPVVHLKDASQNASVASRLLNSQMKAELINELDAEYQALREKSG--LL 897

Query: 901 KSRPVTLEQARANKAAL 917
           +   V+LE+A+ NK  L
Sbjct: 898 RRETVSLEEAQKNKLNL 914