Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., sodium/proton antiporter, CPA1 family from Pseudomonas syringae pv. syringae B728a

 Score = 72.8 bits (177), Expect = 2e-17
 Identities = 92/394 (23%), Positives = 164/394 (41%), Gaps = 67/394 (17%)

Query: 79  FLLFAGGLGIKLPNLKDQKWEITVLALGATLFSTFFIGFTLYGFCQLIGIQFDLVYCLLF 138
           F LF  G+ ++LP L+ + W       G  + +T   G T+ G   +IG+ + +   LL 
Sbjct: 71  FSLFGTGIKLRLP-LRGKAWHSAYWLAGPVMLATI-AGVTVAGH-YIIGLDWGV--SLLL 125

Query: 139 GALISPTDPI-AVLAIVKKLKAPKRISTQIEGESLFNDG--FGLVIFVTIFTIAFGHETP 195
           GA++SPTDP+ A +  V   +   R+   + GE+  NDG  F  VIF  ++  + G  + 
Sbjct: 126 GAMLSPTDPVLAGMVQVNNAQDQDRLRFGLSGEAGLNDGTAFPFVIFALLYLSSGGAMSD 185

Query: 196 TV-GSVTLLFIQEAIGGIVYGFLLG------LLFHYLISATDDHSMELLLTIGIPTAGYA 248
            V G +    I     G++ G+ +G      ++F  + +A    S    L + +    Y 
Sbjct: 186 WVQGWLIKDLIWAVPAGLLIGYGMGRGVGHLMIFLRIKNADSTTSPNDFLALALIALAYV 245

Query: 249 FADVIHVSGPLAMVVSGIMIGNWTRFIGFSKESEEH-----LDH---------------- 287
            A  +   G L++  +G  +      +  S+   EH     L H                
Sbjct: 246 VAQSVGAFGFLSVFAAGFGLRQAEVRVTRSELPSEHVAQPVLGHMTSSLEQGTVAQVDDM 305

Query: 288 ----------------FWELVDEFLNGVLFLLIGMSMLLFEFHQEDWILMAFAVPLVLCG 331
                           F  LV+  +  +L  L+G ++ ++     DW  +   + L    
Sbjct: 306 SDSQLAAGVMMGDMLAFGSLVERAMEVLLITLLGAALAMY----WDWRAIGLGIALFCVI 361

Query: 332 RYLSVFVSYIGFKRYRSYNPWSIRILTWGGLRG-GLALAMALSIPSGIMVIPEKLIDVKE 390
           R  SV++        R  N     ++ W G+RG G    +  ++  G+        DV  
Sbjct: 362 RPASVWL----LVSRRLLNVRQKALVGWFGIRGIGSLYYLCFALSHGL------AHDVGH 411

Query: 391 LILVMTYAVVVFSILVQGSTITPMIEKAKKAEKA 424
           +++ MT +VV  SILV G +I P++E+ +++  A
Sbjct: 412 VVIGMTLSVVALSILVHGISIQPLLERYERSAAA 445