Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score =  132 bits (332), Expect = 3e-35
 Identities = 113/439 (25%), Positives = 200/439 (45%), Gaps = 47/439 (10%)

Query: 6   TLCFLSAAAMLIAFINSKISRMQTTIAITAGSMMLSLLILIAGQNDWFHLNQIATETVTS 65
           T+C L A   L+A I+ +      T  + AG  + +LL    G +    LN         
Sbjct: 42  TICLLGAT--LVALISRRFRIPYVTGLVLAGLTITNLLPRRLGIDSGLILNLF------- 92

Query: 66  INFENFLLKGILGFLLFAGGLGIKLPNLKDQKWEITVLALGATLFSTFFIGFTLYGFCQL 125
                      L  L+F   +   +  L+     I+VLA    L +T      L      
Sbjct: 93  -----------LPILVFQAAINTDISRLRSSFAPISVLAGPGILLATGVTASVLK----- 136

Query: 126 IGIQFDLVYCLLFGALISPTDPIAVLAIVKKLKAPKRISTQIEGESLFNDGFGLVIFVTI 185
            G+  D +  LL G++++ TD ++V+A+ +++  P R++T +EGESLFNDG  LVIF  I
Sbjct: 137 FGLNLDWIPALLVGSILAITDTVSVIAVFREIAVPSRLTTIVEGESLFNDGVALVIFGLI 196

Query: 186 FTIAFGHETPTVGSVTLLFIQEAIGGIVYGFLLGLLFHYLISA-----TDDHSMELLLTI 240
             +  G +   + +V   F+    GG     LLGL   YL S       DD    +LLT+
Sbjct: 197 VELQAGEQVTAISAVQSFFLVVLGGG-----LLGLATGYLASGLFRTLADDSLSGILLTV 251

Query: 241 GIPTAGYAFADVIHVSGPLAMVVSGIMIGNWTRFIGFSKESEEHLDHFWELVDEFLNGVL 300
            +    +   + ++VSG +A+VV+G+ +GN       S  S   L +FWE     +N  +
Sbjct: 252 AVAFGTFQLGEALNVSGVVAVVVAGLTVGNLALDRAQSPSSRLTLINFWEYAAFCVNTFI 311

Query: 301 FLLIGMSMLLFEFHQEDWILMAFAVPLVLCGRYLSVFVSYIGFKRYRSYNP--WSIRILT 358
           FL IG+ +      Q     +  A+      R ++V+       R+    P  W   +L 
Sbjct: 312 FLFIGVEVDPRSLLQ-TLPAVLLAIVAYQLARLVTVYPLMALVNRFDRPIPFRWQ-HVLF 369

Query: 359 WGGLRGGLALAMALSIPSGIMVIPEKLIDVKELILVMTYAVVVFSILVQGSTITPMIEKA 418
            G ++G L++ +ALS+P+         +  +  ++ + + VV+ S++VQG ++   +++ 
Sbjct: 370 LGNIKGSLSMVLALSLPA--------TLGNRSELVNLVFGVVLLSLVVQGLSLPWFVKRL 421

Query: 419 KKAEKALQAERNTDNQSPM 437
           K A ++ +++     Q+ +
Sbjct: 422 KVATRSTRSQEAEQLQAQL 440