Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., Na+/H+ antiporter from Synechococcus elongatus PCC 7942

 Score =  140 bits (353), Expect = 1e-37
 Identities = 112/378 (29%), Positives = 187/378 (49%), Gaps = 24/378 (6%)

Query: 41  SLLILIAGQNDWFHLNQIATETVTSINFENFLLKGI-LGFLLFAGGLGIKLPNLKDQKWE 99
           +LL++IAG         +A   V  IN    L+  I L  LLF     +K  NLK     
Sbjct: 45  TLLLVIAGLG-------LALFNVRLINLSPELILSIFLPPLLFEAAWNLKWNNLKKDWVP 97

Query: 100 ITVLALGATLFSTFFIGFTLYGFCQLIGIQFDLVYCLLFGALISPTDPIAVLAIVKKLKA 159
           I++ A+     S   I F   G  Q   +   +V  LL GA ++ TDP++V+A+ ++L  
Sbjct: 98  ISLYAVIGVGISILGIAF---GLSQTTSVP--IVIALLIGASLATTDPVSVIAMFRELGV 152

Query: 160 PKRISTQIEGESLFNDGFGLVIFVTIFTIAFGHETPTVGSVTLLFIQEAIGGIVYGFLLG 219
            +R  T +EGESLFNDG  +V    +  +    +     S+    I+    GI  G L+G
Sbjct: 153 AERTRTLVEGESLFNDGVAVVTLSLLLALPLEVQGFEAKSLLADLIRYLGIGIGSGCLIG 212

Query: 220 LLFHYLISATDDHSMELLLTIGIPTAGYAFADVIHVSGPLAMVVSGIMIGNWTRFIGFSK 279
               +L    D   +E  LT+      Y  ++ +  SG +A+V  G+++GN+   IG S 
Sbjct: 213 FGVSFLTQRLDLPLLEQSLTLVAAYGSYLLSEQLGGSGVIAVVPVGLILGNFGSRIGMSP 272

Query: 280 ESEEHLDHFWELVDEFLNGVLFLLIGMSMLLFEFHQEDWILMAFAVPLVLCGRYLSVF-V 338
            +   +  FWE +  F+N ++FLLIG  + L    Q    + A  V  +L  R ++ F +
Sbjct: 273 RTRVIVTEFWEFLAFFVNSIVFLLIGDQVPLESLWQNRGAI-AITVVAMLAARAIATFGL 331

Query: 339 SYIGFKRYRSYNPW-SIRILTWGGLRGGLALAMALSIPSGIMVIPEKLIDVKELILVMTY 397
            ++  +   S   W  + ++ WGG+RG +++A+ALSIP+ ++         ++LI    +
Sbjct: 332 GWLSNRLSHSDLSWRELVVVWWGGIRGAVSIALALSIPTVLL--------QRDLITATVF 383

Query: 398 AVVVFSILVQGSTITPMI 415
             V+F++LVQG T+ P++
Sbjct: 384 GSVLFTLLVQGLTMKPLL 401