Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., Na+/H+ antiporter (NCBI) from Rhodospirillum rubrum S1H

 Score = 86.3 bits (212), Expect = 2e-21
 Identities = 87/355 (24%), Positives = 149/355 (41%), Gaps = 40/355 (11%)

Query: 80  LLFAGGLGIKLPNLKDQKWEITVLALGATLFSTFFIGFTLYGFCQLIGIQFDLVYCLLFG 139
           LLF  G  I    +   ++ I  LA G    +    G  ++     +     L       
Sbjct: 64  LLFLDGWHIAREEVFKDRFVILELAFGLVFLTVLGAGLFIHWMIPAM----PLAVAFALA 119

Query: 140 ALISPTDPIAVLAIVKKLKAPKRISTQIEGESLFNDGFGLVI--FVTIFTIAFGHETPTV 197
           A++SPTDPIAV AI K    PKR+   +EGESL ND  GLV   F     +  G    ++
Sbjct: 120 AVVSPTDPIAVSAIAKHAPIPKRMMNILEGESLLNDASGLVCLRFAVAAALTGGF---SL 176

Query: 198 GSVTLLFIQEAIGGIVYGFLL--------GLLFHYLISATDDHSMELLLTIGIPTAGYAF 249
               L F+  A+ GI  G  L         +L   +    +  + + L+++ IP   Y  
Sbjct: 177 TDAALEFLWVALAGIAVGISLTWAVTRSKNMLARRI---GESSATQTLISLLIPFGSYLV 233

Query: 250 ADVIHVSGPLAMVVSGIMIGNWTRFIGFSKESEEHLDHFWELVDEFLNGVLFLLIGMSM- 308
           A+ +  SG LA V +G+ +            +    +  W+ +    NGV+F+++G  + 
Sbjct: 234 AEHLDCSGILAAVAAGVTMSIEESSGQAQAATRIRRNTVWDTIQFAANGVIFVILGEQLP 293

Query: 309 ---------LLFEFHQEDWILMAFAVPLVL---CGRYL----SVFVSYIGFKRYRSYNPW 352
                    +    H E W L  + V + L     R+L    S+ VS +   + R    W
Sbjct: 294 AILESAAETVRVTGHHEPWWLGIYVVAICLGLAALRFLWVWASLQVSLLRTGQKRPPRHW 353

Query: 353 S-IRILTWGGLRGGLALAMALSIPSGIMVIPEKLIDVKELILVMTYAVVVFSILV 406
             I  ++  G+RG + LA  L++P  + +        ++L + +   V++ +++V
Sbjct: 354 RLITAMSLSGVRGAITLAGVLTLP--LTMTDGTAFPARDLAIFLAMGVIIVTMVV 406