Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 424 a.a., Na(+)/H(+) antiporter NhaP from Pseudomonas aeruginosa PA14

 Score =  304 bits (778), Expect = 4e-87
 Identities = 174/413 (42%), Positives = 250/413 (60%), Gaps = 19/413 (4%)

Query: 12  AAAMLIAFINSKISRMQTTIAITAGSMMLSLLILIAGQNDWFHLNQIATETVTSINFENF 71
           A   L+ ++N +  R+  TI + A +++ SL++    +  +  L     E +  I+F   
Sbjct: 10  ALTTLLTYVNYRFIRLPPTIGVMATALVFSLIVQGLSELGYPILEVEMQEIIRRIDFSEV 69

Query: 72  LLKGILGFLLFAGGLGIKLPNLKDQKWEITVLALGATLFSTFFIGFTLYGFCQLIGIQFD 131
           L+   L  LLFAG L + L +L+  KW I +LA    L +TF IG   Y    L G Q D
Sbjct: 70  LMTWFLPALLFAGALHVDLSDLRSYKWPIGLLATAGVLIATFVIGGLAYYTFPLFGWQVD 129

Query: 132 LVYCLLFGALISPTDPIAVLAIVKKLKAPKRISTQIEGESLFNDGFGLVIFVTIFTIAFG 191
            +YCLLFGALISPTDPIAVL I+K   APK ++T I GESLFNDG  +V+F  I  I   
Sbjct: 130 FIYCLLFGALISPTDPIAVLGILKSAGAPKPLATTIVGESLFNDGTAVVVFAIILGILQL 189

Query: 192 HETPTVGSVTLLFIQEAIGGIVYGFLLGLLFHYLISATDDHSMELLLTIGIPTAGYAFAD 251
            E PTV +  +LF+QEAIGG+++G +LG     ++   D + +E++LT+ +   G A A 
Sbjct: 190 GEAPTVSATAILFVQEAIGGVLFGAVLGYGVFVMMRGIDQYQVEVMLTLALVIGGAALAA 249

Query: 252 VIHVSGPLAMVVSGIMIGNWTRFIGFSKESEEHLDHFWELVDEFLNGVLFLLIGMSMLLF 311
            +HVS P+AMVV+G++IGN  R    S E+  ++D FWEL+DE LN +LF LIG+ +LL 
Sbjct: 250 RLHVSAPIAMVVAGLIIGNHGRHYAMSDETRRYVDKFWELIDEILNALLFALIGLELLLL 309

Query: 312 EFHQEDWILMAFAVPL---VLCGRYLSVFVSYIGFKRYRSYN----PWSIRILTWGGLRG 364
            F    W+ +A A  L   VL  R L+V  + +  +R+R  N      +IRIL WGGLRG
Sbjct: 310 PF---SWLHVAAAFALGGAVLVSRLLTVGPAILVLRRFRGANRQVPAGTIRILVWGGLRG 366

Query: 365 GLALAMALSIPSGIMVIPEKLIDVKELILVMTYAVVVFSILVQGSTITPMIEK 417
           G+++A+ALS+P G    PE     ++LIL +TY VV+ SIL+QG +I P++ +
Sbjct: 367 GVSVALALSLPLG----PE-----RDLILSLTYIVVLVSILLQGLSIGPLVRR 410