Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., Na+/H+ antiporter from Pseudomonas aeruginosa PA14

 Score =  104 bits (259), Expect = 8e-27
 Identities = 101/361 (27%), Positives = 169/361 (46%), Gaps = 40/361 (11%)

Query: 80  LLFAGGLGIKLPNLKDQKWEITVLALGATLFSTFFIGFTLYGFCQLIGIQFDLVYCLLFG 139
           LLF  G  I    +   +W I ++A G   F+    G+    F  L+  +  L       
Sbjct: 63  LLFVDGWRIPKREVWRMRWPILMMAFGLVFFTVVGAGY----FIHLLIPEIPLAASFALA 118

Query: 140 ALISPTDPIAVLAIVKKLKAPKRISTQIEGESLFNDGFGLVIFVTIFTIAFGHETPTVGS 199
           A++SPTD +AV AI +  + PKR+   +EGE+L ND  GLV F      A       V  
Sbjct: 119 AVLSPTDALAVSAITQG-RLPKRLMHLLEGEALMNDASGLVAFKFAIAAAMTGVFSLV-D 176

Query: 200 VTLLFIQEAIGGIVYG----FLLGLLFHYLIS-ATDDHSMELLLTIGIPTAGYAFADVIH 254
            +L F+  A+GG+  G    + LG +  ++IS   DD +  ++L + +P A Y  A+ + 
Sbjct: 177 ASLNFLLVAVGGLAIGVFLSWSLGRIRAWMISRGWDDPATHVVLMLLLPFASYMVAEHLG 236

Query: 255 VSGPLAMVVSGIMIGNWTRFIGFSKESEEHLDHFWELVDEFLNGVLFLLIGMS----MLL 310
           VSG L+ V +G M+ +W   +     +       W +++   NGV+FLL+G+     M  
Sbjct: 237 VSGILSAVAAG-MMQSWVDLLPRQTSTRLLNRSVWSMLEFAFNGVVFLLLGLQLPDIMKS 295

Query: 311 FEFHQED--W---ILMAF------AVPLVLCGRYLSVFVSYIGFKRYRSYNP-----WSI 354
              H  D  W   +L+A+       + L+  G     +   +   R+R  +P      S+
Sbjct: 296 VANHHGDLLWRSSLLLAYVAAITAVLMLIRYGWVYGYWKLSLRIDRWRGKSPPGLSGISL 355

Query: 355 RILT----WGGLRGGLALAMALSIPSGIMVIPEKLIDVKELILVMTYAVVVFSILVQGST 410
           R L+      G+RG + LA  LS+P  +M         ++LI+ +  +V++ S++  G+T
Sbjct: 356 RRLSALSALSGVRGAVTLAAVLSVPMSLM--DGSAFPQRDLIIFIATSVILISLI--GAT 411

Query: 411 I 411
           I
Sbjct: 412 I 412