Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 396 a.a., sodium/hydrogen exchanger (RefSeq) from Shewanella loihica PV-4

 Score = 96.7 bits (239), Expect = 1e-24
 Identities = 101/381 (26%), Positives = 181/381 (47%), Gaps = 47/381 (12%)

Query: 48  GQNDWFHLNQIATETVTSINFENFLLKGILGFLLFAGGLGIKLPNLKDQKWEITVLALGA 107
           G+ ++ + N   T TV ++          L  ++F GG+  K  ++K    E  VLA   
Sbjct: 45  GEFNFVYDNLTLTSTVGAV---------ALNMIVFVGGINTKTESIKLAYREGGVLATFG 95

Query: 108 TLFSTFFIGFTLYGFCQLIGIQFDLVYCLLFGALISPTDPIAVLAIV--KKLKAPKRIST 165
            L +T  +G  LY   +     + LV CLLF A++S TD  AV +I+  KKLK  +R  T
Sbjct: 96  VLLTTLILGALLYPLTE-----WSLVICLLFAAVVSSTDAAAVFSILESKKLKLKERTDT 150

Query: 166 QIEGESLFNDGFGLVIFVTIFTIAFGHETP----TVGSVTLLFIQEAIGGIVYGFLLGLL 221
            +E ES  ND   LV+ + +  IA   + P     +G   +L +Q A+ GI   F++  L
Sbjct: 151 VLEFESATNDPVALVMVMILTGIALAPDAPVSPWAIGQ--MLGLQIAL-GIGVAFVVARL 207

Query: 222 FHYLISATDDHSMELLLTIGIPTAGYAFA----DVIHVSGPLAMVVSGIMIGNWTRFIGF 277
             + +++   H  E  L      A +  A    ++   +  +A  V G+++GN  R    
Sbjct: 208 AVWALNSI--HLEEYGLIPVFVLASFVLAAYGSELAGGNILIASYVCGVVMGNGIR---- 261

Query: 278 SKESEEHLDHFWELVDEFLNGVLFLLIGMSMLLFEFHQEDWILMAFAVPLVLCGRYLSVF 337
                E   HF+  +      ++F+++G+ +         ++ +  A  L+L  R L+V 
Sbjct: 262 --RGVEVTRHFFNSLSWLAQSLMFIILGLQIFPQTLFSVFFLSLIPAALLMLVARPLAVQ 319

Query: 338 VSYIGFKRYRSYNPWSIRI-LTWGGLRGGLALAMALSIPSGIMVIPEKLIDVKELILVMT 396
           + Y+ F++      W  R+ ++  GL+G   +  +L IP+   V  E  +++  L+    
Sbjct: 320 ICYLPFRQ----ASWKKRLFISSIGLKGATPIVFSL-IPAAAGV--EGAVEMVHLV---- 368

Query: 397 YAVVVFSILVQGSTITPMIEK 417
           + +V+FSIL+QG+ I P+ ++
Sbjct: 369 FFIVLFSILLQGAAIEPLAKR 389