Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  348 bits (894), Expect = e-100
 Identities = 179/368 (48%), Positives = 251/368 (68%)

Query: 1   MSVYYTLCFLSAAAMLIAFINSKISRMQTTIAITAGSMMLSLLILIAGQNDWFHLNQIAT 60
           M+ Y  LC L A A++ +  +S++ ++Q T+AITA ++ +SLL+L+ G+    H+     
Sbjct: 1   MTSYQILCILCALALVTSVASSRLHKLQETVAITALALGMSLLLLLGGKALGGHVYGYFV 60

Query: 61  ETVTSINFENFLLKGILGFLLFAGGLGIKLPNLKDQKWEITVLALGATLFSTFFIGFTLY 120
             +  ++F+  LL G+LGFLLFAG L I+L  L+ QKWEI +LA  +TL STF +G  LY
Sbjct: 61  AGLEKLDFQALLLNGMLGFLLFAGALQIRLKILRHQKWEILILAFVSTLLSTFIVGGLLY 120

Query: 121 GFCQLIGIQFDLVYCLLFGALISPTDPIAVLAIVKKLKAPKRISTQIEGESLFNDGFGLV 180
               ++G+   L +CLLFGALISPTDPIAVLAI+KK+ AP+ I+ Q+EGESLFNDG GLV
Sbjct: 121 YIAPMLGLPLALSHCLLFGALISPTDPIAVLAILKKMGAPEDIAIQVEGESLFNDGIGLV 180

Query: 181 IFVTIFTIAFGHETPTVGSVTLLFIQEAIGGIVYGFLLGLLFHYLISATDDHSMELLLTI 240
           IFV I  +AF  E  T   ++LLF+QEA+GG+VYG +LG+L H+     ++ +  +L+T+
Sbjct: 181 IFVAISHLAFSTEPLTFSQISLLFVQEALGGVVYGAVLGVLLHHFFRYCEEETQLMLVTL 240

Query: 241 GIPTAGYAFADVIHVSGPLAMVVSGIMIGNWTRFIGFSKESEEHLDHFWELVDEFLNGVL 300
            IPTAGY  A+V+ VSGPLAMV +G++IGN++    F +     L  FW L++ F N +L
Sbjct: 241 LIPTAGYVIAEVLGVSGPLAMVSAGMIIGNYSVPKYFVRHERVKLYTFWSLIESFFNALL 300

Query: 301 FLLIGMSMLLFEFHQEDWILMAFAVPLVLCGRYLSVFVSYIGFKRYRSYNPWSIRILTWG 360
           FLL+G+ +LL  F    W  M  A+PLVL  R +SVF+ YIGF+  +SYNP++  IL WG
Sbjct: 301 FLLLGLLLLLVTFKAPLWWFMLVAIPLVLTARAVSVFLPYIGFRMVKSYNPYAESILIWG 360

Query: 361 GLRGGLAL 368
           GLRGG  L
Sbjct: 361 GLRGGAGL 368