Pairwise Alignments

Query, 444 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 670 a.a., sodium/hydrogen exchanger (RefSeq) from Shewanella sp. ANA-3

 Score = 60.8 bits (146), Expect = 1e-13
 Identities = 79/349 (22%), Positives = 146/349 (41%), Gaps = 53/349 (15%)

Query: 80  LLFAGGLGIKLPNLKDQKWEIT-------VLALGATLFSTFFIGFTLYGFCQLIGIQFDL 132
           +LF G L +    +KD    +T       V+  G    +TF++            + F  
Sbjct: 69  ILFEGALTLNFKEIKDHGRMVTHLVSIGMVITWGCISVATFYL------------LNFSW 116

Query: 133 VYCLLFGALISPTDPIAVLAIVKKLKAPKRISTQIEGESLFNDGFGLVIFVTIFTIAFGH 192
              LLFGAL+  T P  ++ +++ ++   ++++ +  E +  D  G ++ V +F      
Sbjct: 117 EVALLFGALVVVTGPTVIVPMLRSVRPKSQLASILRWEGIVIDPIGALLAVLVFEYITVS 176

Query: 193 ETPTVGSVTLLFIQEAIG---GIVYGFLLG------LLFHYLISATDDHSMELLLTIGIP 243
             PT   +  L     +G   G   G+L+G      LL HYL      ++  L L +GI 
Sbjct: 177 GDPTSHVLYALGSMLTLGLGLGAASGYLIGQVIRRNLLPHYL-----RNTAVLTLMLGIF 231

Query: 244 TAGYAFADVIHVSGPLAMVVSGIMIGNWTRFIGFSKESEEHLDHFWELVDEFLNGVLFLL 303
                  +    SG L + V GI + N  R +  ++  E     F E +   L   LF+L
Sbjct: 232 VGSNLLQE---ESGLLTVTVMGIWLAN-MRGVDIAEILE-----FKETLTVLLISALFIL 282

Query: 304 IGMSMLLFEFHQEDWILMAFAVPLVLCGRYLSVFVSYIGFKRYRSYNPWSIRILTWGGLR 363
           +   +         W  +      +L  R LS++VS IG    ++ + W    L W   R
Sbjct: 283 LAARLDSNAMMDLGWGGVGVLAVTMLVARPLSIWVSGIGTSLSKA-DKW---FLCWIAPR 338

Query: 364 GGLALAMALSIPSGIMVIPEKLIDVK--ELILVMTYAVVVFSILVQGST 410
           G +A A+     S +  I  +  +V+  + I+ + + +++ ++++Q  T
Sbjct: 339 GIVAAAV-----SSLFAIKLEATNVQGADAIVPLVFLIIIGTVVIQSLT 382