Pairwise Alignments

Query, 614 a.a., assimilatory sulfite reductase (NADPH) flavoprotein subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., phycobilisome linker polypeptide from Synechocystis sp000284455 PCC 6803

 Score = 94.4 bits (233), Expect = 9e-24
 Identities = 69/228 (30%), Positives = 118/228 (51%), Gaps = 20/228 (8%)

Query: 401 RLYSIASSQ-SEVGEE--VHLTVGVVEYEYEGEQRLGGASSFLAHQLEEGAPVKVFVEHN 457
           RLYSIAS++  + G++  V L V  +EY+ E  + + G  S     ++EG  + +     
Sbjct: 192 RLYSIASTRHGDFGDDKTVSLCVRQLEYQNEAGETVQGVCSTYLCNIKEGDDIAITGPVG 251

Query: 458 NNFKLPSDDNAPLIMVGPGTGIAPFRSFI-----QERENRGAAGKNWLLFGDRTFTQDFL 512
               LP D++A ++M+  GTGIAPFR+F+     ++ E+    G  WL+FG    +++ L
Sbjct: 252 KEMLLPPDEDANIVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGLAWLIFGIPK-SENIL 310

Query: 513 YQVEWQKYLKSGVLN-RLDVAFSRDQHE----KVYVQHRLLEQAELVWQWLQE-GAYFYV 566
           Y+ + +K       N RL  A SR+Q      ++Y+QHR+ E AE +W  +Q    + Y+
Sbjct: 311 YKDDLEKMAAEFPDNFRLTYAISREQQNAEGGRMYIQHRVAENAEELWNLMQNPKTHTYM 370

Query: 567 CGDASRMAKDVHQALITVVEQQGGLNREQAEEYVSELRKAKRYQRDVY 614
           CG    M   + +A   + EQ G    ++   +  E++K  R+  + Y
Sbjct: 371 CG-LKGMEPGIDEAFTALAEQNG----KEWTTFQREMKKEHRWHVETY 413



 Score = 25.0 bits (53), Expect = 0.006
 Identities = 10/48 (20%), Positives = 22/48 (45%)

Query: 246 YSKEQPYTASLSTSQKITGRDSGKDVRHIEIDLADSGITYQPGDALGV 293
           Y  + PY   +  +  +    +   V+H+  DL+   + Y  G ++G+
Sbjct: 130 YRPKTPYIGKVLENYPLVREGAIGTVQHLTFDLSAGDLRYLEGQSIGI 177