Pairwise Alignments

Query, 221 a.a., iron-hydroxamate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 55.1 bits (131), Expect = 1e-12
 Identities = 63/254 (24%), Positives = 98/254 (38%), Gaps = 52/254 (20%)

Query: 6   SAALVTALMVMPLSASAAESFYTASVGAEMWLASTK---------IDNTRRDDANAPNLY 56
           +A+L++AL     +A+    F    VGA+ W A  K         +     D +   +++
Sbjct: 7   AASLLSALAAFSANAATVVGF---KVGADYWHADAKGNVPDDAGNLHGFDYDTSGQTSVW 63

Query: 57  FTFEHGFPYLPNVGLRYTNLEADFASFD---------------------KIDYTFYYPLL 95
           F  EH  P LPN+ +R   LE D  + D                       D+  YY LL
Sbjct: 64  FAVEHPVPLLPNLLIRENRLEEDGFNADATLAFGGIPFNGELYSTMDLSNTDFVLYYELL 123

Query: 96  NRELMKFDVGITLTQYANSDYRAPD----ARRYDFDQTTFNWYASAEITIPHTPFDVIGQ 151
           + +++  DVG    +  N   R  +    A + DF       YASA + +P      +G 
Sbjct: 124 DNDIVSLDVGGAYKK-MNGSLRISNASGVAAQKDFTDGIIMGYASAVVGMPG-----LGL 177

Query: 152 FDFGN----NSDLKSSDVMAGLQYHLPIRAGDLAFKAGYRVVDLEFTELAKQSTDVKQSF 207
           + F +      + +  D   GL +     A D   +AGYR    +       STD   SF
Sbjct: 178 YGFADLMAGLDESQVYDYSVGLGWEFDGIALDTRIRAGYREFSFDVNGFDGISTD--SSF 235

Query: 208 VFADGWFVGAQFSF 221
               G+F G +  F
Sbjct: 236 ---KGYFAGVELLF 246