Pairwise Alignments

Query, 221 a.a., iron-hydroxamate ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 53.5 bits (127), Expect = 3e-12
 Identities = 47/194 (24%), Positives = 75/194 (38%), Gaps = 39/194 (20%)

Query: 56  YFTFEHGFPYLPNVGLRYTNLE-------ADFA--------------SFDKIDYTFYYPL 94
           +F  EH  P++PN+ +R  +L+       ADF+                   D+  YY L
Sbjct: 49  WFAVEHPLPFVPNLKIRENSLDQKGSLANADFSFNGHDFKGNVTSYTDLSNTDFVLYYEL 108

Query: 95  LNRELMKFDVGITLTQYANSDYRAPD---ARRYDFDQTTFNWYASAEITIPHTPFDVIGQ 151
           L+ +++ FD+G    +  N   R  D       D D      YAS  +++P      +G 
Sbjct: 109 LDNDILSFDLGAAY-KLMNGSLRVQDPGHPEEKDVDGGIVMGYASTHVSMPG-----LGL 162

Query: 152 FDFGN----NSDLKSSDVMAGLQYHLPIRAGDLAFKAGYRVVDLEFTELAKQSTDVKQSF 207
           F F +     ++    D   GL +     A D   + GYR    +    +  S D K   
Sbjct: 163 FGFADLMLGVNESNVHDYAIGLGWQFDGAAVDTRVRVGYREFAFDVNNFSGISADTK--- 219

Query: 208 VFADGWFVGAQFSF 221
              DG+F G +  F
Sbjct: 220 --FDGYFAGVEIDF 231