Pairwise Alignments

Query, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., tRNA dihydrouridine synthase A from Pseudomonas stutzeri RCH2

 Score =  381 bits (979), Expect = e-110
 Identities = 187/315 (59%), Positives = 234/315 (74%), Gaps = 2/315 (0%)

Query: 4   SCRLSVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGRGD-FLAYNQEEHPVAL 62
           S R SVAPM+DWTDRHCRYF R LS   LLYTEMVTTGA++HG    FL +++ EHP+AL
Sbjct: 15  SRRFSVAPMMDWTDRHCRYFLRQLSRHALLYTEMVTTGALLHGDAQRFLRHDESEHPLAL 74

Query: 63  QFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMR 122
           Q GGS P +LA CAKLA+  GYDE+NLNVGCPSDRVQN   GACLMG P LVA+CV AMR
Sbjct: 75  QLGGSVPAELAACAKLAEAAGYDEVNLNVGCPSDRVQNNMIGACLMGHPQLVADCVKAMR 134

Query: 123 AVVDIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREI 182
             V + VTVK RIGI+ +DSY  L  F+  V +  GC  FT+HAR A L GLSPK+NRE+
Sbjct: 135 DAVGVEVTVKHRIGINGRDSYAELCDFVGQVRD-AGCRSFTVHARIAILEGLSPKQNREV 193

Query: 183 PPLDYPRAYQIKRDFPHLTIAVNGGVKSLEEAKLHLQHLDGVMIGREAYQNPYLLAEVDQ 242
           PPL Y  A Q+K+DFP L I +NGG+K+L+E + HLQ  DGVM+GREAY NPYLLA VD 
Sbjct: 194 PPLRYDIAAQLKQDFPDLEIILNGGIKTLDECRAHLQTFDGVMLGREAYHNPYLLARVDH 253

Query: 243 QIFGLETPVKKRSQVIHEMMPYIERELSQGTHLGHMTRHMLGLFQNMPGARQWRRHISEN 302
           ++FG +TPV  R+Q +  M PYIE+ L++G  + H+TRH+LGL Q  PGAR++R+ +S +
Sbjct: 254 ELFGSDTPVIGRAQALRNMRPYIEQHLAEGGAMHHITRHVLGLGQGFPGARRFRQLLSVD 313

Query: 303 AHKPGAGLEVVEQAL 317
            HK    L +++QA+
Sbjct: 314 IHKTSQPLALLDQAV 328