Pairwise Alignments

Query, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

Subject, 321 a.a., tRNA-U20a,U20b-dihydrouridine synthase from Pseudomonas syringae pv. syringae B728a

 Score = 77.0 bits (188), Expect = 6e-19
 Identities = 71/249 (28%), Positives = 109/249 (43%), Gaps = 28/249 (11%)

Query: 6   RLSVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGRGDFLAYNQEEH------- 58
           ++++APM    D   R     +       TE +     +     F  Y  E H       
Sbjct: 2   QIALAPMEGLVDDILRNVLTKVGGIDWCVTEFIRVSERLMPAHYFYKYASEFHNGAKTDA 61

Query: 59  --PVALQFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAE 116
             P+ LQ  GS+P  LA  A  A E G   ++LN GCP+  V   R GA L+ EP+L+  
Sbjct: 62  GTPLRLQLLGSDPVCLAENAAFACELGAPVLDLNFGCPAKTVNRSRGGAVLLKEPELLHT 121

Query: 117 CVAAMRAVV--DIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGL 174
            V+ +R  V  DIPVT K R+G ++ D    L    A     GG EQ  +HAR       
Sbjct: 122 IVSQVRRAVPKDIPVTAKMRLGYENTD----LALDCARALADGGAEQIVVHAR------- 170

Query: 175 SPKENREIPPLDYPRAYQIKRDFPHLTIAVNGGVKSLEEAKLHLQHLDG---VMIGREAY 231
             K +   PP  +    +I ++   + +  NG + ++E+ +   + + G   +MIGR   
Sbjct: 171 -TKVDGYKPPAHWEWIARI-QEVVKVPVVANGEIWTVEDWR-RCREICGARDIMIGRGLV 227

Query: 232 QNPYLLAEV 240
             P L  ++
Sbjct: 228 ARPDLARQI 236