Pairwise Alignments

Query, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

Subject, 349 a.a., Dihydrouridine synthase TIM-barrel protein yjbN (NCBI) from Rhodospirillum rubrum S1H

 Score =  335 bits (859), Expect = 1e-96
 Identities = 170/324 (52%), Positives = 224/324 (69%), Gaps = 9/324 (2%)

Query: 6   RLSVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGR-GDFLAYNQEEHPVALQF 64
           RLSVAPM+DWTDRH R+F R ++ +TLLYTEM+T  A++H   G FL ++ +EHP+ALQ 
Sbjct: 20  RLSVAPMMDWTDRHDRWFLRQITKRTLLYTEMITAQALLHADPGRFLDHHPDEHPLALQL 79

Query: 65  GGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMRAV 124
           GGS+P+ LA   +LA   G+ EINLNVGCPSDRV +GRFGACLM +P LVAEC++AM   
Sbjct: 80  GGSDPRALAEATRLAAPFGFAEINLNVGCPSDRVSSGRFGACLMADPALVAECLSAMAEA 139

Query: 125 VDIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREIPP 184
            + PVT+K RIGIDD DSY+ L  F+  VA + G     +HARKAWL GLSPKENREIPP
Sbjct: 140 SNAPVTIKHRIGIDDLDSYDQLVGFVDQVA-RSGIATIIVHARKAWLKGLSPKENREIPP 198

Query: 185 LDYPRAYQIKRDFPHLTIAVNGGVKSLEEAKLHL-------QHLDGVMIGREAYQNPYLL 237
           L +   +++K DFP L + +NGG+ +L +A  HL         +DGVMIGR AY+ PY+L
Sbjct: 199 LRHDVVHRLKADFPGLEVILNGGITTLTQALDHLGSGDPAAPAVDGVMIGRAAYETPYML 258

Query: 238 AEVDQQIFGLETPVKKRSQVIHEMMPYIERELSQGTHLGHMTRHMLGLFQNMPGARQWRR 297
           A+ D  IFG  TP   R +V   ++PY++   ++G  +  +TRH+LGLF   PGAR +RR
Sbjct: 259 AQADGLIFGEATPAPSRHEVALALLPYLDAMTARGEPVKRLTRHILGLFHGQPGARAYRR 318

Query: 298 HISENAHKPGAGLEVVEQALAKIP 321
           H+ E   +P A  +V+  ALA IP
Sbjct: 319 HLGEAGVRPDATAQVLIDALAHIP 342