Pairwise Alignments

Query, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

Subject, 329 a.a., tRNA-dihydrouridine synthase A (RefSeq) from Shewanella loihica PV-4

 Score =  479 bits (1232), Expect = e-140
 Identities = 226/313 (72%), Positives = 265/313 (84%), Gaps = 1/313 (0%)

Query: 8   SVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGRGDFLAYNQEEHPVALQFGGS 67
           S+APMLDWTDRH RYF RL+S++ LLYTEMVTTGAIIHG+GD+LAYNQEEHP+ALQ GGS
Sbjct: 15  SIAPMLDWTDRHYRYFARLMSSELLLYTEMVTTGAIIHGKGDYLAYNQEEHPLALQLGGS 74

Query: 68  NPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMRAVVDI 127
           NP+DLA CAKLA ERGYDE+NLNVGCPSDRVQNGRFGACLM EPDLVA+CVAAM  VVDI
Sbjct: 75  NPEDLAKCAKLAAERGYDEVNLNVGCPSDRVQNGRFGACLMAEPDLVAQCVAAMNEVVDI 134

Query: 128 PVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREIPPLDY 187
           PVTVKTRIGID+QDSYEFLT+F+  V+   GC+ F IHARKAWL GLSPKENREIP LDY
Sbjct: 135 PVTVKTRIGIDEQDSYEFLTEFVDKVS-AAGCDTFIIHARKAWLQGLSPKENREIPELDY 193

Query: 188 PRAYQIKRDFPHLTIAVNGGVKSLEEAKLHLQHLDGVMIGREAYQNPYLLAEVDQQIFGL 247
            R Y++K+D+P L+I++NGGVK+LEE   HL+ LDGVM+GREAYQNPYLLA+VDQQ+ GL
Sbjct: 194 DRVYRLKQDYPQLSISINGGVKTLEECGEHLKQLDGVMVGREAYQNPYLLAQVDQQLCGL 253

Query: 248 ETPVKKRSQVIHEMMPYIERELSQGTHLGHMTRHMLGLFQNMPGARQWRRHISENAHKPG 307
           + PV  R  V+  M+PYIE+ L  G  L H+TRHM GL+Q   G+R WRR++SENAHKPG
Sbjct: 254 DKPVLSRDAVLENMIPYIEKHLVSGGRLNHITRHMTGLYQGEAGSRAWRRYLSENAHKPG 313

Query: 308 AGLEVVEQALAKI 320
           AG+ VV +A A +
Sbjct: 314 AGIAVVHEARASM 326