Pairwise Alignments

Query, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., tRNA-dihydrouridine synthase, TIM-barrel, YjbN from Marinobacter adhaerens HP15

 Score =  384 bits (987), Expect = e-111
 Identities = 189/318 (59%), Positives = 233/318 (73%), Gaps = 2/318 (0%)

Query: 4   SCRLSVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHG-RGDFLAYNQEEHPVAL 62
           S R  VAPM+DWT  H RY  R LS  TLLYTEMVTTGA+IHG    FL +++ E+P+AL
Sbjct: 17  SRRFCVAPMMDWTTSHYRYLARQLSRHTLLYTEMVTTGALIHGDTARFLRHDEAEYPLAL 76

Query: 63  QFGGSNPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMR 122
           Q GGS+  +LAHCA+LAQ+ G+DE+NLNVGCPSDRVQN   GACLMG PD VAE V AM 
Sbjct: 77  QLGGSDAGELAHCARLAQQYGFDEVNLNVGCPSDRVQNNMIGACLMGHPDKVAEGVRAMI 136

Query: 123 AVVDIPVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREI 182
              D+PVTVK RIGID ++S++ L +F+  V+E  GC  F +HAR A L GLSPKENRE+
Sbjct: 137 EATDLPVTVKHRIGIDGRESWDDLCEFVEKVSE-AGCRTFIVHARIAILEGLSPKENREV 195

Query: 183 PPLDYPRAYQIKRDFPHLTIAVNGGVKSLEEAKLHLQHLDGVMIGREAYQNPYLLAEVDQ 242
           PPL Y   Y++K  +PHL I +NGG+K+  E   HL+H DGVM+GREAY NP+LLA VD 
Sbjct: 196 PPLKYDWVYRLKAKYPHLEIIINGGIKTFGECHEHLRHTDGVMLGREAYHNPWLLAGVDP 255

Query: 243 QIFGLETPVKKRSQVIHEMMPYIERELSQGTHLGHMTRHMLGLFQNMPGARQWRRHISEN 302
           + FG   PV+ R Q +  M+P+I  EL +G  L HM+RH+LGLF   PG RQ+RR+ISEN
Sbjct: 256 EFFGQAAPVETRHQALRAMLPFIGSELERGVFLTHMSRHLLGLFHGQPGGRQFRRYISEN 315

Query: 303 AHKPGAGLEVVEQALAKI 320
           AHK GAGLEV+E AL K+
Sbjct: 316 AHKSGAGLEVIETALEKV 333