Pairwise Alignments

Query, 327 a.a., tRNA dihydrouridine(20/20a) synthase DusA from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., tRNA-dihydrouridine synthase A (RefSeq) from Shewanella sp. ANA-3

 Score =  489 bits (1258), Expect = e-143
 Identities = 233/313 (74%), Positives = 263/313 (84%), Gaps = 1/313 (0%)

Query: 8   SVAPMLDWTDRHCRYFHRLLSAQTLLYTEMVTTGAIIHGRGDFLAYNQEEHPVALQFGGS 67
           S+APMLDWTDRH RYF RL+SA  LLYTEMVTTGAI+HGRGD+LAYNQEEHP+ALQ GGS
Sbjct: 17  SIAPMLDWTDRHYRYFARLMSANALLYTEMVTTGAILHGRGDYLAYNQEEHPLALQLGGS 76

Query: 68  NPKDLAHCAKLAQERGYDEINLNVGCPSDRVQNGRFGACLMGEPDLVAECVAAMRAVVDI 127
           NP +LA CAKLA ERGYDE+NLNVGCPSDRVQNGRFGACLM EP+LVAECV AM+  VDI
Sbjct: 77  NPAELARCAKLAAERGYDEVNLNVGCPSDRVQNGRFGACLMAEPELVAECVDAMKQAVDI 136

Query: 128 PVTVKTRIGIDDQDSYEFLTQFIATVAEKGGCEQFTIHARKAWLSGLSPKENREIPPLDY 187
           PVTVKTRIGID+QDSYEFLT FI TV  K GC +F IHARKAWL GLSPKENREIPPLDY
Sbjct: 137 PVTVKTRIGIDEQDSYEFLTHFIDTVMAK-GCGEFIIHARKAWLQGLSPKENREIPPLDY 195

Query: 188 PRAYQIKRDFPHLTIAVNGGVKSLEEAKLHLQHLDGVMIGREAYQNPYLLAEVDQQIFGL 247
            R YQ+KRD+P L I++NGG+ SLE+AK HLQHLDGVM+GREAYQNPY+LA+VDQ + G 
Sbjct: 196 DRVYQLKRDYPTLNISINGGITSLEQAKTHLQHLDGVMVGREAYQNPYILAQVDQLLCGS 255

Query: 248 ETPVKKRSQVIHEMMPYIERELSQGTHLGHMTRHMLGLFQNMPGARQWRRHISENAHKPG 307
           +  V  R  VI  M+PYIE  L  G  L H+TRHM+GLFQ +PGAR WRR++SENAHK G
Sbjct: 256 QKAVMSREAVIETMLPYIEAHLQAGGRLNHITRHMIGLFQGLPGARAWRRYLSENAHKNG 315

Query: 308 AGLEVVEQALAKI 320
           AG+EVV+QA   I
Sbjct: 316 AGIEVVKQAYQSI 328