Pairwise Alignments

Query, 392 a.a., MBL fold metallo-hydrolase from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., outer membrane protein RomA (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (515), Expect = 9e-57
 Identities = 114/304 (37%), Positives = 172/304 (56%), Gaps = 15/304 (4%)

Query: 64  SYFGG-RAQLKPNAQLPVAPLNLQALQTRSKALRVTWLGHSSLFIEVDGLRVLTDPVF-D 121
           +Y G  R+   P + +P+ P+    L  R +A R+  LGHS++ + +DG  +LTDPVF +
Sbjct: 35  AYLGAKRSAPSPKSAVPLQPITPAEL-ARPQA-RLYRLGHSTVLMYLDGKWLLTDPVFSE 92

Query: 122 YASP--WIAKAWFARNLPNSGVREQLPLPDVIVISHDHYDHLEQASVVYYAAHSVTFYVP 179
            ASP  W     F ++       E LP  D +++SHDHYDHL+ A++   AA    FY+P
Sbjct: 93  RASPFQWAGPKRFHQS---PIAIEALPDIDGLILSHDHYDHLDTAAIKALAARVKHFYMP 149

Query: 180 LGVGQHLIRWGVSPERIIEFDWWEQIKREGVEFICTPANHNSGRYYLDHNATLWCSWVIK 239
           LGVG+ LIR G+   RI E DWW+ ++   +E   TPA H SGR   D +ATLW  W I 
Sbjct: 150 LGVGKRLIRLGIDKARITELDWWQSVQLGTIELTATPAQHFSGRGLFDRDATLWAGWAIH 209

Query: 240 GHQETLYFSGDSAYDTHFAKIAERCGPIDLACLEVAADVKQHQGYPVENWGHMQAKHTVQ 299
           G Q  ++FSGDS Y   FA+I ER GP D+  +E  A  +  +        HM  + ++Q
Sbjct: 210 GEQARVFFSGDSGYFPGFAEIGERLGPFDVTLMETGAYNELWRDI------HMMPEESLQ 263

Query: 300 AFRDLQAKKLLPIHWATYELFTHQWDEPIADLVKHCQEQSITLLTPMAGESLTMANHSAS 359
           A  D++ + ++PIH  T++L  H W EP+  +     ++S+ + TP+ GE+L++    + 
Sbjct: 264 AHLDVKGQLMVPIHNGTFDLALHDWFEPLERIRALAWDRSVKIATPIFGEALSLTLPGSG 323

Query: 360 HAWW 363
             WW
Sbjct: 324 SDWW 327