Pairwise Alignments

Query, 375 a.a., alanine racemase from Vibrio cholerae E7946 ATCC 55056

Subject, 819 a.a., bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase from Pedobacter sp. GW460-11-11-14-LB5

 Score =  147 bits (371), Expect = 1e-39
 Identities = 116/368 (31%), Positives = 184/368 (50%), Gaps = 30/368 (8%)

Query: 22  INLEALQHNLQRVKQQA-PESKIMAVVKANGYGHGLRHIAR----HALGADAFGVARIEE 76
           I+L A+  NLQ  + +  P  K+MA+VKA  YG G   IA     H +  D   VA  +E
Sbjct: 462 IDLNAMVSNLQFYRSKIKPGVKMMAMVKAFSYGSGSFEIANLLQFHKV--DYLAVAYADE 519

Query: 77  ALQLRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQ----ALEQAQLETPVM 132
            + LR +G+  PI+++    S  +   ++ + ++  ++  E L     AL     + P+ 
Sbjct: 520 GIALRKAGITLPIMVMSPEESAFE--AIIKHKLEPEIYSIEILNSFLNALSDYDFDYPIH 577

Query: 133 VWLKVDSGMHRLGVRPEQYQDFVARLHQCENVAKPLRYMSHFGCADELDKST-TVEQTEL 191
           +  K+DSGMHRLG    +  D ++ L +     K     SH   +D  +    T +Q E 
Sbjct: 578 I--KIDSGMHRLGFDQPEI-DTLSNLLKDSAKVKVQSVFSHLVASDAAEHDGFTQQQIER 634

Query: 192 FLSLTQGCQGERS------LAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQ 245
           F  +        S      ++ ++G+  WP+ Q++ VR GI +YG   F    A   G Q
Sbjct: 635 FKIIADQLLEALSYKPLLHISNTSGISRWPEGQMDMVRLGIGLYG---FDSALANNRGLQ 691

Query: 246 PVMTLKSHLIAVREVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPNGT-PVVVN 304
            VMTLK+ +  V+ +  GE+VGY          KI  + IGY DGY R   NG   +++N
Sbjct: 692 TVMTLKTTVTQVKTLAPGETVGYSRKGVMPNGGKIATVKIGYADGYTRYFGNGVGKMLIN 751

Query: 305 GRRVPIAGRVSMDMLTVDL-GPDACDRVGDEAMLWGNELPVEEVAAHIGTIGYELVTKLT 363
           G  VP  G + MDM  +D+ G D   + GDEA+++     + ++A  IGTI YE++T ++
Sbjct: 752 GHLVPTIGSICMDMTMLDITGIDV--KPGDEAIVFNKAHTIMQLARDIGTIPYEILTNIS 809

Query: 364 SRVEMSYY 371
            RV+  Y+
Sbjct: 810 QRVKRVYF 817