Pairwise Alignments

Query, 375 a.a., alanine racemase from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., alanine racemase from Herbaspirillum seropedicae SmR1

 Score =  290 bits (742), Expect = 4e-83
 Identities = 162/351 (46%), Positives = 218/351 (62%), Gaps = 8/351 (2%)

Query: 20  AYINLEALQHNLQRVKQQAPESKIMAVVKANGYGHGLRHIARHALGADAFGVARIEEALQ 79
           A I++ ALQHNL   +  AP +++  V+KANGYGHGL    R    AD   +   + A++
Sbjct: 7   ASISISALQHNLAVARAHAPGARVWGVLKANGYGHGLERAMRGFAAADGLALIEPDYAVR 66

Query: 80  LRASGVVKPILLLEGFYSPGDLPVLVTNNIQTVVHCEEQLQALEQAQLETPVMVWLKVDS 139
           LR  G  KPILLLEGF+   DLPVL  ++IQ  VHCEEQ+  LE       +   LK++S
Sbjct: 67  LRELGWTKPILLLEGFFDADDLPVLAQHDIQFAVHCEEQIAQLEAFTAAASLHAHLKMNS 126

Query: 140 GMHRLGVRPEQYQDFVARLHQCENVAKPLRYMSHFGCADELDKSTT--VEQTELFLSLTQ 197
           GM+RLG +PE Y+   ARL +  +VA  +  M+HF  AD+         EQ   F + ++
Sbjct: 127 GMNRLGFKPETYRAAYARLQKIPSVAS-ITLMTHFANADDAGNPLLPLAEQVRRFQAGSE 185

Query: 198 GCQGERSLAASAGLLAWPQSQLEWVRPGIIMYGVSPFVEKSAVQLGYQPVMTLKSHLIAV 257
           G  G RSL  SA  L   +   +WVRPG+++YG +P    SA   G +  MTL+S +I +
Sbjct: 186 GLDGPRSLCNSAADLMHAELANDWVRPGVMLYGGTPG-GGSAADFGLRAAMTLESRIIGI 244

Query: 258 REVKAGESVGYGGTWTSQRDTKIGVIAIGYGDGYPRTAPNGTPVVVNGRRVPIAGRVSMD 317
           ++V AGE++GYG  + + +  KIGV+A GY DGYPR APNGTPV+V+G +    GRVSMD
Sbjct: 245 QQVPAGEAIGYGSRFVADKPMKIGVVACGYADGYPRHAPNGTPVLVDGVKTGTVGRVSMD 304

Query: 318 MLTVDLG--PDACDRVGDEAMLWGNELPVEEVAAHIGTIGYELVTKLTSRV 366
           MLTVDL   PDA   VG +  LWG++LP++EVA   GTIGYEL+  L  RV
Sbjct: 305 MLTVDLTHIPDA--DVGSQVELWGSKLPIDEVAYAAGTIGYELMCALAPRV 353