Pairwise Alignments

Query, 468 a.a., replicative DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., replicative DNA helicase (phage and plasmid) from Pseudomonas syringae pv. syringae B728a

 Score =  406 bits (1043), Expect = e-118
 Identities = 215/449 (47%), Positives = 316/449 (70%), Gaps = 20/449 (4%)

Query: 24  PPHSLEAEQSVIGGLLLDNERWDTVSEHVMTQDFYSRPHRLIFDGVKSILEAGKPLDLIT 83
           PPHS+EAEQ+V+GGL+LDN+ WD +++ +   DFY   HRLIF  +  + E+ +P D++T
Sbjct: 8   PPHSVEAEQAVLGGLMLDNDSWDLIADRIKADDFYRAEHRLIFQSIAGLAESNRPFDVVT 67

Query: 84  LSEYLEQREQLEDVGGFAYLADLAKNTPSAANINAYAEIVAERALVRNLIGVANEIADAG 143
           +S+ +     ++  GG AYL++LAKNTPS ANI AYAE V+ RA +R +I          
Sbjct: 68  VSDSITA---IDAAGGLAYLSELAKNTPSVANIKAYAETVSNRAHLRRIISHGYACTREA 124

Query: 144 YDPQGRNAEDLLDLAESKVFAIAEARTSENEGPKNVDSILERTLERIELLYKTPQDGVTG 203
            DPQ  NA ++ D+ E ++FA+ + R + +    +V+ +L + +++I+L +   +  V G
Sbjct: 125 SDPQA-NASEVQDVIEQQLFALGQGRQTSDF--VDVNQMLMQVVDKIDLRFNAGES-VVG 180

Query: 204 VNTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMNLCENAAMEQDKP--VLIFSLEMP 261
           + TG +DL++ T GLQ +DLII+AARPSMGKT+ A+NL + AA+++D    V ++SLEMP
Sbjct: 181 LPTGLSDLDELTGGLQPADLIIIAARPSMGKTSLALNLVD-AALQKDTQATVQVYSLEMP 239

Query: 262 AEQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGILMEKKNMY-----IDDSSGLT 316
           AE I+ R+++ L  ++  K+  GQL+DEDW +++    + ++K N Y     IDD + LT
Sbjct: 240 AEAIIYRLISILGHLNLEKLIRGQLEDEDWPKLA----MAVQKINSYGDRLVIDDQADLT 295

Query: 317 PTEVRSRARRIAREHGGLSLIMVDYLQLMRVPALTDNRTLEIAEISRSLKALAKELNVPV 376
           P+ +R+RARR AR  G   LI++DYLQ+M+ P   +NRT EI+EISRSLKALAKE + PV
Sbjct: 296 PSAIRARARRGARRFGKPVLILIDYLQMMKCPG-KENRTNEISEISRSLKALAKEFDCPV 354

Query: 377 VALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHPDSPLKGTAEIIIG 436
           VALSQLNR LE+R +KRP+N+DLRESG++EQDADLI+F+YRDEVY+PDS  KG AE+I+ 
Sbjct: 355 VALSQLNRELERRPNKRPINADLRESGALEQDADLILFVYRDEVYNPDSEQKGVAELILS 414

Query: 437 KQRNGPIGSVRLTFQGHYSRFDNYAGPAF 465
           K RNG +G+VR  F   ++RF+N +  A+
Sbjct: 415 KHRNGALGTVRTAFIPQHTRFENLSAAAW 443