Pairwise Alignments

Query, 468 a.a., replicative DNA helicase from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., primary replicative DNA helicase from Pseudomonas syringae pv. syringae B728a

 Score =  552 bits (1422), Expect = e-161
 Identities = 271/457 (59%), Positives = 364/457 (79%), Gaps = 6/457 (1%)

Query: 15  DAQVDAIKVPPHSLEAEQSVIGGLLLDNERWDTVSEHVMTQDFYSRPHRLIFDGVKSILE 74
           D Q  A+KVPPHS+EAEQ+V+GGL+LDN  W+ V + V   DFY   HRLIF  +  + +
Sbjct: 11  DLQTAALKVPPHSIEAEQAVLGGLMLDNNAWERVLDQVSDGDFYRHDHRLIFRAIARLAD 70

Query: 75  AGKPLDLITLSEYLEQREQLEDVGGFAYLADLAKNTPSAANINAYAEIVAERALVRNLIG 134
              P+D++TL+E L++  Q   VGG  YL++LAKNTPS ANI AYA+IV  RA +R LIG
Sbjct: 71  QNSPIDVVTLAEQLDKEGQTSQVGGLGYLSELAKNTPSVANIKAYAQIVRARATLRQLIG 130

Query: 135 VANEIADAGYDPQGRNAEDLLDLAESKVFAIAEARTSENEGPKNVDSILERTLERIELLY 194
           ++ EIAD+ ++P+GR AE++LD AE ++F IAEAR  +  GP +V+ +L + ++RI+ L+
Sbjct: 131 ISTEIADSAFNPEGRTAEEILDEAERQIFQIAEAR-PKTGGPVSVNDLLTKAIDRIDTLF 189

Query: 195 KTPQDGVTGVNTGFTDLNKKTAGLQGSDLIIVAARPSMGKTTFAMNLCENAAMEQDKPVL 254
            +  + +TG++TG+TDL++KT+GLQ SDLIIVA RPSMGKTTFAMNL ENA +  DK VL
Sbjct: 190 NS-DNAITGLSTGYTDLDEKTSGLQPSDLIIVAGRPSMGKTTFAMNLVENAVLRSDKVVL 248

Query: 255 IFSLEMPAEQIMMRMLASLSRVDQTKIRTGQLDDEDWARISSTMGILMEKKNMYIDDSSG 314
           ++SLEMP E ++MRML+SL R+DQTK+R GQLDD+DW R++S + +L ++K ++IDD++G
Sbjct: 249 VYSLEMPGESLIMRMLSSLGRIDQTKVRAGQLDDDDWPRLTSAVNLLNDRK-LFIDDTAG 307

Query: 315 LTPTEVRSRARRIAREHGGLSLIMVDYLQLMRVPALT-DNRTLEIAEISRSLKALAKELN 373
           ++P+E+R+R RRI REHG +++IM+DYLQLM++P  + DNRT EI+EISRSLKALAKE N
Sbjct: 308 ISPSEMRARTRRIVREHGDIAMIMIDYLQLMQIPGSSGDNRTNEISEISRSLKALAKEFN 367

Query: 374 VPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYRDEVYHPDSPLKGTAEI 433
            PV+ALSQLNRSLEQR +KRP+NSDLRESG+IEQDAD+IMF+YRDEVYHP++  KG AEI
Sbjct: 368 CPVIALSQLNRSLEQRPNKRPINSDLRESGAIEQDADVIMFVYRDEVYHPETEHKGIAEI 427

Query: 434 IIGKQRNGPIGSVRLTFQGHYSRFDNYAGPA--FDDE 468
           IIGKQRNGPIG+ RL F G Y+RF+N A  +  FDD+
Sbjct: 428 IIGKQRNGPIGTTRLAFIGKYTRFENLAPGSYNFDDD 464