Pairwise Alignments

Query, 240 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  170 bits (431), Expect = 2e-47
 Identities = 92/222 (41%), Positives = 141/222 (63%), Gaps = 6/222 (2%)

Query: 20  VKPFTEHDKVILRSYEAVVDGIASLIGPFCEIVLHSLEDLNTSAIKIANGENTGRQVGSP 79
           ++  T+ D  IL+S E +VDGIA++ G   E+VLHSL+  + S IKIANG  TGR+VG+P
Sbjct: 3   LQELTQSDLDILKSIENIVDGIAAMYGEHTEVVLHSLDAKHPSVIKIANGHVTGREVGAP 62

Query: 80  ITDMALKMLRDIEGSERNFSRSYFTRAKGGVLMKSITVAIRNGENRVIGLLCINVNLDAP 139
           IT++AL  L+    + ++ S SY T+   G  ++SIT  IRN +N  IGLLCIN ++DAP
Sbjct: 63  ITNLALLKLK----TGQDISNSYLTKCANGKTLRSITTVIRNPKNLPIGLLCINTDMDAP 118

Query: 140 FSQVLKSFMPTQ--EAQEAASSVNFASDVEELVDQTVERTIEEINGDKSVSNNTKNRQIV 197
              VL++ MP Q   ++  +S   FA +++E +  T++    EI  + ++S + K+R+IV
Sbjct: 119 LQSVLRTMMPEQLLGSELTSSPEVFARNIDEALHSTIDSVNHEIRANPAISASQKSREIV 178

Query: 198 MALFDKGIFDIKDAINRVADRLNISKHTVYLYIRQRKTEDDE 239
             L + GIF++KD+    A RL IS H++Y Y+R+ K    E
Sbjct: 179 NQLHELGIFELKDSAQVAATRLGISVHSIYRYLREIKANQAE 220