Pairwise Alignments

Query, 327 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., WD-40 repeat-containing protein (RefSeq) from Shewanella loihica PV-4

 Score =  168 bits (426), Expect = 1e-46
 Identities = 109/322 (33%), Positives = 170/322 (52%), Gaps = 10/322 (3%)

Query: 4   RIYHSLCALLVILMLSGCFFTHQAEQQWDLAPEGSTAFGLSRDGRFALIYSKQQQLVLWD 63
           R+ H    +   L+LS C       +   L  E S    LS   R+ L+ +    L LWD
Sbjct: 5   RLLHFCTLIACTLLLSAC---QPKPEVSSLVAEPSYDASLSPQARYLLVSTTSNNLQLWD 61

Query: 64  LLQDKKLADLGAQDPQANPVSVIRIADSERFAVTASQNNFAVWDLAWTQGKGLWSI-TDG 122
           L + K L                 ++D+ ++A + S+++ A+W++   Q  G WS+  +G
Sbjct: 62  LSK-KTLKYQWLHGKAGGTAIATALSDNLKYAASLSRDSVALWNMDDGQPLGWWSLPANG 120

Query: 123 LIRDVDLSSDGEQVLLGLTNGKAIYVDLVSGRRMEFLAHREKVNSVALSANGRYALTGGN 182
               +   +D   +L+GLT+G  + ++  +   ++FL H EKVNSVALSA+GR+AL+GGN
Sbjct: 121 QCLAL---ADNGTLLIGLTDGSVMSLNHQTDTLIKFLGHSEKVNSVALSADGRWALSGGN 177

Query: 183 DYHAYLWDTKTGQIVRQFEHEQRVNRVTLQREGKLAFTSDGGNQALIWDLTADSKPI-QL 241
           D   +LW   TGQ + Q++   RV  V+L ++  LAF +D  N+A IW  T   KP+  L
Sbjct: 178 DNKVFLWQANTGQPLHQWQLPSRVLEVSLSQDASLAFAADSTNKADIWQ-TQTGKPVSSL 236

Query: 242 QSFRRQLIFSTARFSDDGKKLITGTPSGLVEVWNTQDGKKIASFESENKKDHGPTQAVVY 301
           +  RR + FSTARF+ D + L+TGTP+  V VW   DGK  A+++    +      AVVY
Sbjct: 237 KIKRRTMNFSTARFTKDNQTLLTGTPAREVSVWRVADGKMRANWQVTRTERAQIKGAVVY 296

Query: 302 DAAFDAQQRAVAGSSAGIAQAW 323
             A     + ++ SS G+ + W
Sbjct: 297 SVAETINGQIISFSSNGLLETW 318