Pairwise Alignments

Query, 327 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., vegetatible incompatibility protein HET-E-1 from Caulobacter crescentus NA1000

 Score = 47.4 bits (111), Expect = 5e-10
 Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 9/163 (5%)

Query: 122 GLIRDVDLSSDGEQVLLGLTNGKAIYVDLVSGRRMEFLAHREK---VNSVALSA-NGRYA 177
           G +    +   G  ++ G  +G+ ++  +  G  +  L    K   +  VA SA +G  A
Sbjct: 49  GAVLAAAVHPSGAGIVTGGDDGRVVWSRIEGGEVVATLIAEVKNKWIEHVAASAASGLIA 108

Query: 178 LTGGNDYHAYLWDTKTGQIVRQFEHEQRVNRVTLQREGKLAFTSDGGNQALIWDLTADSK 237
            T G + H    D       R F HE+ V+ +  + +G+   ++  G   L +   AD K
Sbjct: 109 FTVGKEVHVR--DAADPAFARTFPHEKTVSGLAFEPKGRRLASATYGGAYLWYARIADQK 166

Query: 238 PIQLQSFRRQLIFSTARFSDDGKKLITGTPSGLVEVWNTQDGK 280
           P  L+     +      FS DGK LI+      +  W   DGK
Sbjct: 167 PTVLKWAGSHI---AVEFSPDGKFLISSMQENQLHGWRLSDGK 206



 Score = 26.6 bits (57), Expect = 0.001
 Identities = 36/159 (22%), Positives = 56/159 (35%), Gaps = 10/159 (6%)

Query: 127 VDLSSDGEQVLLGLTNGKAIYVDLVSGRRMEFLAHREKVNSVALSANGRYALTGGNDYHA 186
           V+ S DG+ ++  +   +     L  G+ M    +  K+ SVA    G    T G    A
Sbjct: 179 VEFSPDGKFLISSMQENQLHGWRLSDGKDMRMGGYPSKIKSVAFFDKGNLLATAGAS-GA 237

Query: 187 YLWD--TKTGQIVRQ-----FEHEQRVNRVTLQREGKLAFTSDGGNQALIWDLTADSKPI 239
            +W      G + ++     F  +  V RV       +     G +   IW     +  I
Sbjct: 238 VIWPFAGANGPMGKEAAEIGFSRDSMVVRVAGIDPQPVCIA--GQDSGKIWAAHMRNGRI 295

Query: 240 QLQSFRRQLIFSTARFSDDGKKLITGTPSGLVEVWNTQD 278
           +     +    S    S DGK+L  G  SG   V    D
Sbjct: 296 ETLKAEKGAPISALSVSADGKRLAWGDESGEAGVLEIPD 334