Pairwise Alignments

Query, 326 a.a., protease modulator HflC from Vibrio cholerae E7946 ATCC 55056

Subject, 288 a.a., Membrane protease subunits, stomatin/prohibitin homologs from Pseudomonas stutzeri RCH2

 Score =  235 bits (599), Expect = 1e-66
 Identities = 125/321 (38%), Positives = 201/321 (62%), Gaps = 38/321 (11%)

Query: 3   KLLIPSIVLIIAALLM--SMFVIPEGERGIVIRFGRVLKDNNDLARIYEPGLHFKMPLFD 60
           K L   IV ++AA+++  S +++ + ER +++RFGR+++ +       +PGLH K+P  +
Sbjct: 4   KSLTALIVGVVAAIVLWNSFYIVSQTERAVLLRFGRIVEPD------VKPGLHMKIPYVN 57

Query: 61  RVKTLDARIQTMDGRSDRFVTSEKKDVIIDTYVKWRIEDFGQYYLATGGGNALTAEALLE 120
            V+  DAR+ T+D  + RF+T EKK +++D+Y KWR++D  ++Y AT G   + A+  L 
Sbjct: 58  SVRKFDARLLTLDTTTSRFLTLEKKALMVDSYAKWRVDDAERFYTATSGVKQI-ADERLA 116

Query: 121 RKVTDVLRSEIGAREIKQIVSGPRNVAVLPENADSSELTTEAAKEAMEIDGQRDQIMSEV 180
           R++   LR + G R + + VSG                             QRD++M++V
Sbjct: 117 RRLEAALRDQFGKRTLHESVSG-----------------------------QRDELMAQV 147

Query: 181 LNDTRESAMKDLGVYVVDFRMKKINLPDEISESIYRRMRAERESVARKHRSQGREKAEVI 240
                 +A ++LG+ VVD R+K I+LP E++ S++ RM +ERE  AR+HR++G+E AE I
Sbjct: 148 TTSLNRAAQQELGIEVVDVRVKGIDLPREVNRSVFERMSSEREREAREHRAKGKELAEGI 207

Query: 241 RAQAELEVATILAEADKTARVTRGTADAEAAKIYSDAYKKDPEFFSFLRSLRAYEKSFNS 300
           RA A+ +   +LAEA + A   RG  DA+AA IY+ AY +D EF++F RSL+AY +SF+S
Sbjct: 208 RADADRQRRVLLAEAFREAEELRGDGDAKAAAIYASAYGQDQEFYAFHRSLQAYRESFSS 267

Query: 301 KNDILVLDPNSEFFQYMNNAK 321
           K D+LVLDP S+FF+Y+ ++K
Sbjct: 268 KEDVLVLDPKSDFFRYLESSK 288