Pairwise Alignments

Query, 326 a.a., protease modulator HflC from Vibrio cholerae E7946 ATCC 55056

Subject, 315 a.a., membrane protein from Azospirillum brasilense Sp245

 Score =  171 bits (434), Expect = 2e-47
 Identities = 100/323 (30%), Positives = 177/323 (54%), Gaps = 40/323 (12%)

Query: 2   RKLLIPSIVLIIAALLMS--MFVIPEGERGIVIRFGRVLKDNNDLARIYEPGLHFKMPLF 59
           R LL+  I ++ A +L S  +F + E ++ +V++FG  ++       I EPGL  K+P  
Sbjct: 3   RTLLVAGIGILAAGVLASASLFTVNEAQQALVLQFGEPMRV------IREPGLKAKVPFI 56

Query: 60  DRVKTLDARIQTMDGRSDRFVTSEKKDVIIDTYVKWRIEDFGQYYLATGGGNALTAEALL 119
             V+ LD R+  +D   ++ + +++K + +D + ++RI D  ++Y   G  N   AE  +
Sbjct: 57  QEVRILDRRVLDLDPPVEQVILADQKRLDVDAFARYRILDPLRFYQTAG--NEAVAETRM 114

Query: 120 ERKVTDVLRSEIGAREIKQIVSGPRNVAVLPENADSSELTTEAAKEAMEIDGQRDQIMSE 179
              V   LR  +G+  +  I+S                              +R ++M++
Sbjct: 115 NAIVNSALRRVLGSVTLLAILSD-----------------------------ERPRVMND 145

Query: 180 VLNDTRESAMKDLGVYVVDFRMKKINLPDEISESIYRRMRAERESVARKHRSQGREKAEV 239
           +     + A K  G+ +VD R+++ +LP+E S+SI+ RMR+ERE  A + R+QG+E+++ 
Sbjct: 146 IRGQVNDEA-KRFGIEIVDVRIRRADLPEETSQSIFARMRSEREREAAEARAQGQEQSQQ 204

Query: 240 IRAQAELEVATILAEADKTARVTRGTADAEAAKIYSDAYKKDPEFFSFLRSLRAYEKSFN 299
           IR++A+ E   ILAEA + +++ RG  D +A K+ ++A  +DP+F+SF R+L AY KS N
Sbjct: 205 IRSRADRERTVILAEAQRDSQILRGEGDNQALKMIAEATSQDPQFYSFYRTLEAYRKSLN 264

Query: 300 SKNDILVLDPNSEFFQYMNNAKG 322
             +  +VL P  EFF+Y  +  G
Sbjct: 265 KDDTTMVLSPTGEFFRYFGDITG 287