Pairwise Alignments

Query, 326 a.a., protease modulator HflC from Vibrio cholerae E7946 ATCC 55056

Subject, 297 a.a., hflC protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  321 bits (822), Expect = 2e-92
 Identities = 172/329 (52%), Positives = 228/329 (69%), Gaps = 36/329 (10%)

Query: 1   MRKLLIPSIVLIIAALLMSMFVIPEGERGIVIRFGRVLKDNND---LARIYEPGLHFKMP 57
           M +L I  I +I+   L S+ V+ EGER IV RFG ++KDN D   + R++ PGLHFK+P
Sbjct: 1   MGRLSIVLIAVILGIGLSSVMVVNEGERAIVARFGEIVKDNVDGKQVTRVFSPGLHFKVP 60

Query: 58  LFDRVKTLDARIQTMDGRSDRFVTSEKKDVIIDTYVKWRIEDFGQYYLATGGGNALTAEA 117
           + D+VK LDARIQT+DG +DRFVTSEKKD+++D+YVKWRI DF +YYL+T GG    AE 
Sbjct: 61  VIDKVKLLDARIQTLDGAADRFVTSEKKDLMVDSYVKWRIFDFEKYYLSTNGGIKSNAET 120

Query: 118 LLERKVTDVLRSEIGAREIKQIVSGPRNVAVLPENADSSELTTEAAKEAMEIDGQRDQIM 177
           LL+RK+ + LR+E G R IK+IVS                             GQRD++ 
Sbjct: 121 LLQRKINNDLRTEFGRRTIKEIVS-----------------------------GQRDELQ 151

Query: 178 SEVLNDTRESAMKDLGVYVVDFRMKKINLPDEISESIYRRMRAERESVARKHRSQGREKA 237
           +  L +  ESA KDLG+ VVD R+K+INLP  +S SIY+RMRAER++VA++HR+QG+E++
Sbjct: 152 NNALANAAESA-KDLGIEVVDVRVKQINLPANVSNSIYQRMRAERQAVAKEHRAQGKEQS 210

Query: 238 EVIRAQAELEVATILAEADKTARVTRGTADAEAAKIYSDAYKKDPEFFSFLRSLRAYEKS 297
           E+IRA  +  V   +AEA++ A   RG  DA AAKIYSDAY KDPEFFSF+RSL AY  S
Sbjct: 211 EIIRATIDANVTVKIAEAERKALTIRGEGDALAAKIYSDAYNKDPEFFSFMRSLDAYRAS 270

Query: 298 FNSKNDILVLDPNSEFFQYMNNAKGAAAK 326
           F+  +DI+VL+P+SEFF+YM   K +AAK
Sbjct: 271 FSGNSDIMVLEPDSEFFKYM---KSSAAK 296