Pairwise Alignments

Query, 429 a.a., GTPase HflX from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., ribosome biogenesis GTPase Der from Pseudomonas fluorescens SBW25-INTG

 Score = 55.8 bits (133), Expect = 3e-12
 Identities = 50/172 (29%), Positives = 78/172 (45%), Gaps = 23/172 (13%)

Query: 197 IPTISLVGYTNAGKSTLFNRIT--------EAGVYAADQLFATLDPTLRKIDLVDVGPAV 248
           +P I+LVG  N GKSTLFNR+T        +      D+ +       R   +VD G  +
Sbjct: 2   VPVIALVGRPNVGKSTLFNRLTRTRDAIVGDLSGLTRDRQYGEAKWQGRSYIIVDTG-GI 60

Query: 249 LADTVGFIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVETVLQE-IDA 307
             D  G    +    + A        +EAD++L +VDA     R    A + ++ E +  
Sbjct: 61  SGDEHGMDEKMAEQSLLAI-------EEADVVLFLVDA-----RAGYTAADQMIGEHLRK 108

Query: 308 HEVPTLLVMNKIDNLEEQSPRIERDDEGVPRVVWISAMQGAG-TELLFEALS 358
               + LV NKIDN++ +  R E    G+   + ++   G G T++L  ALS
Sbjct: 109 RNKRSYLVANKIDNIDPEQARAEFSPMGLGDAIPVAGAHGRGITQMLEIALS 160



 Score = 38.9 bits (89), Expect = 4e-07
 Identities = 51/200 (25%), Positives = 87/200 (43%), Gaps = 18/200 (9%)

Query: 179 EKVAKQREQGRRARSRAEIP--TISLVGYTNAGKSTLFNR-ITEAGVYAADQLFATLDPT 235
           E++  + E+ +R    +E     I+++G  N GKSTL NR + E  V   D+   T D  
Sbjct: 174 EEIVAEGEEAKRIPGPSEKDGIKIAIIGRPNVGKSTLVNRMLGEDRVIVYDEPGTTRDSI 233

Query: 236 LRKIDLVDVGPAVLADTVGF-IRHLPHDLVAAFKA--TLQETQEADILLHVVDASDERFR 292
               +  D     L DT G   R   H+ V  F    TLQ  ++A++++ V+DA +    
Sbjct: 234 YIPFERND-EKYTLIDTAGVRKRGKIHEEVEKFSVVKTLQAIKDANVVIFVMDAREGVVD 292

Query: 293 ENIQAVETVLQEIDAHEVPTLLVMNKIDNL---EEQSPRIERDDE----GVPRVVWISAM 345
            ++  +   L+   A     ++ +NK D +   E    +IE            + +ISA+
Sbjct: 293 HDLNLLGFALEAGRA----LVIAINKWDGMTPSERDFVKIELQRRLFFVEFADIHFISAL 348

Query: 346 QGAGTELLFEALSERLASQV 365
            G G   L+ ++     S V
Sbjct: 349 HGTGVGNLYASVQNSFKSAV 368