Pairwise Alignments

Query, 429 a.a., GTPase HflX from Vibrio cholerae E7946 ATCC 55056

Subject, 437 a.a., putative phosphoglycerate dehydrogenase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 56.2 bits (134), Expect = 2e-12
 Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 21/177 (11%)

Query: 200 ISLVGYTNAGKSTLFNRIT---------EAGVYAADQLFATLDPTLRKIDLVDVGPAVLA 250
           +++VG  N GKSTLFNR+T         EAG    D+ +   +   R+  +VD G  V+ 
Sbjct: 5   VAIVGRPNVGKSTLFNRLTKTRQAIVNEEAGT-TRDRQYGKSEWLGREFSVVDTGGWVVN 63

Query: 251 DTVGFIRHLPHDLVAAFKATLQETQEADILLHVVDASDERFRENIQAVETVLQEIDAHEV 310
               F   +        K  L   +EAD++L VVD  +     ++Q V T+L+  ++   
Sbjct: 64  SDDIFEEEIR-------KQVLLAVEEADVILFVVDVMNGVTDLDMQ-VATILRRANS--- 112

Query: 311 PTLLVMNKIDNLEEQSPRIERDDEGVPRVVWISAMQGAGTELLFEALSERLASQVVE 367
           P ++V NK DN E Q    E    G+     ISA+ G+GT  L + +  +   +  E
Sbjct: 113 PVIMVANKTDNNELQYNAPEFYKLGLGDPYCISAITGSGTGDLMDLIVSKFNKETSE 169



 Score = 31.6 bits (70), Expect = 5e-05
 Identities = 32/152 (21%), Positives = 69/152 (45%), Gaps = 19/152 (12%)

Query: 196 EIPTISLVGYTNAGKSTLFNR--------ITEAGVYAADQLFATLDPTLRKIDLVDVGPA 247
           +IP  ++VG  NAGKS++ N         +TE      D ++   +       LVD    
Sbjct: 174 DIPRFAVVGRPNAGKSSIVNAFIGEDRNIVTEIAGTTRDSIYTRYNKFGFDFYLVDTAGI 233

Query: 248 VLADTVGFIRHLPHDL-VAAFKATLQETQEADILLHVVDASDERFRENIQAVETVLQEID 306
              + V        DL   +   +++  + AD+ + ++DA+     +++     +L  I 
Sbjct: 234 RKKNKVN------EDLEYYSVVRSIRSIENADVCILMLDATRGVESQDL----NILSLIQ 283

Query: 307 AHEVPTLLVMNKIDNLEEQSPRIERDDEGVPR 338
            ++   ++V+NK D +E+++ ++ ++ E   R
Sbjct: 284 KNQKGLVVVINKWDLIEDKTAKMMKEFEATIR 315