Pairwise Alignments

Query, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

Subject, 80 a.a., RNA-binding protein Hfq from Sinorhizobium meliloti 1021

 Score = 77.4 bits (189), Expect = 3e-20
 Identities = 35/77 (45%), Positives = 57/77 (74%), Gaps = 1/77 (1%)

Query: 3  KGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILL-KNTVNQMVYKHAIST 61
          + Q+LQD FLN +R+++I ++I+L+NG+KL G + SFD F +LL ++  +Q+VYKHAIST
Sbjct: 4  RSQNLQDLFLNTVRKQKISLTIFLINGVKLTGVVTSFDNFCVLLRRDGHSQLVYKHAIST 63

Query: 62 VVPARPVSHHSGDRPAS 78
          ++P +P+     +  AS
Sbjct: 64 IMPGQPLQMFENEEAAS 80