Pairwise Alignments

Query, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

Subject, 91 a.a., host factor-I protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  130 bits (328), Expect = 2e-36
 Identities = 66/75 (88%), Positives = 70/75 (93%), Gaps = 2/75 (2%)

Query: 1  MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS 60
          MAKGQSLQDPFLNALRRER+PVSIYLVNGIKLQGQ+ESFDQFVILLKNTV+QMVYKHAIS
Sbjct: 1  MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS 60

Query: 61 TVVPARP--VSHHSG 73
          TVVP+RP  V  H G
Sbjct: 61 TVVPSRPFNVGSHQG 75