Pairwise Alignments

Query, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

Subject, 79 a.a., protein hfq (RNA chaperone hfq) from Phaeobacter inhibens DSM 17395

 Score = 84.0 bits (206), Expect = 3e-22
 Identities = 38/71 (53%), Positives = 58/71 (81%), Gaps = 1/71 (1%)

Query: 5  QSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILL-KNTVNQMVYKHAISTVV 63
          Q+LQD FLN +R+ ++PV+I+L+NG+KLQG I  FD F +LL ++  +Q+VYKHAIST++
Sbjct: 6  QNLQDAFLNHVRKTKVPVTIFLINGVKLQGVITWFDNFCVLLRRDGQSQLVYKHAISTIM 65

Query: 64 PARPVSHHSGD 74
          PA+P+S + G+
Sbjct: 66 PAQPISLYEGE 76