Pairwise Alignments

Query, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

Subject, 92 a.a., RNA chaperone Hfq (RefSeq) from Shewanella loihica PV-4

 Score =  133 bits (334), Expect = 5e-37
 Identities = 68/81 (83%), Positives = 73/81 (90%), Gaps = 3/81 (3%)

Query: 1  MAKGQSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILLKNTVNQMVYKHAIS 60
          MAKGQSLQDPFLNALRRER+PVSIYLVNGIKLQGQ+ESFDQFVILLKNTV+QMVYKHAIS
Sbjct: 1  MAKGQSLQDPFLNALRRERVPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS 60

Query: 61 TVVPARPV---SHHSGDRPAS 78
          TVVPARP    SHH+    A+
Sbjct: 61 TVVPARPFNVSSHHNTPNQAA 81