Pairwise Alignments

Query, 87 a.a., RNA-binding protein Hfq from Vibrio cholerae E7946 ATCC 55056

Subject, 92 a.a., RNA chaperone Hfq (RefSeq) from Dinoroseobacter shibae DFL-12

 Score = 84.0 bits (206), Expect = 3e-22
 Identities = 38/71 (53%), Positives = 57/71 (80%), Gaps = 1/71 (1%)

Query: 5  QSLQDPFLNALRRERIPVSIYLVNGIKLQGQIESFDQFVILL-KNTVNQMVYKHAISTVV 63
          Q+LQD FLN +R+ ++PV+++L+NG+KLQG I  FD F +LL ++  +Q+VYKHAISTV+
Sbjct: 21 QNLQDAFLNHVRKTKVPVTVFLINGVKLQGVITWFDNFCVLLRRDGQSQLVYKHAISTVM 80

Query: 64 PARPVSHHSGD 74
          P +P+S + GD
Sbjct: 81 PTQPISLYEGD 91