Pairwise Alignments

Query, 315 a.a., tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., tRNA delta(2)-isopentenylpyrophosphate transferase (RefSeq) from Shewanella amazonensis SB2B

 Score =  392 bits (1006), Expect = e-114
 Identities = 194/300 (64%), Positives = 236/300 (78%), Gaps = 3/300 (1%)

Query: 5   LPLALFLMGPTASGKTDLAIRLRQKYPVEIISVDSALIYRGMDIGTAKPDAQELALAPHR 64
           LP  LFLMGPTASGKT LA+ + + +  EIISVDSALIYRGMDIGTAKP A ELA APH+
Sbjct: 4   LPKVLFLMGPTASGKTALALDMAEHHNCEIISVDSALIYRGMDIGTAKPTASELARAPHK 63

Query: 65  LIDILDPSEAYSAADFRRDALKEMADIVAQGKIPLLVGGTMLYFKALLEGLSPLPAADPV 124
           LIDILDP E+YSAADFR DA++E+ + +++GK PLLVGGTM+YFK LL+GLSPLP+AD  
Sbjct: 64  LIDILDPLESYSAADFRADAVREIEETLSRGKTPLLVGGTMMYFKTLLDGLSPLPSADDA 123

Query: 125 IRQQIELEAEKLGWQALHDQLQQIDPVSAQRIHPNDPQRLSRALEVYRISGKTLTELTQT 184
           +R QI  E E  GWQALHD+L+ IDPVSA+RIHPNDPQRLSRA+EVYRISGKTLTELT+ 
Sbjct: 124 VRAQIAAEVEARGWQALHDELRNIDPVSAERIHPNDPQRLSRAIEVYRISGKTLTELTKI 183

Query: 185 KGEAIPYRVLQFAIAPKERAELHRRIELRFEKMVESGFEEEVKALYARDDLHPDLPSIRC 244
           K E++PY ++QFAIAP++R  LH  I  RF++M+  GF  EV+ L AR DLH +LPS+RC
Sbjct: 184 KAESLPYHMVQFAIAPQDRTVLHGLIAKRFQQMLAEGFIGEVETLKARGDLHLELPSMRC 243

Query: 245 VGYRQMWDYLDGHGTLDEAIYRGICATRQLAKRQITWLRSWDDLTWL---DSENVDQAVE 301
           VGYRQ W YLDG       + + + ATRQLAKRQ+TWLR W +L WL   D  N+D+ V+
Sbjct: 244 VGYRQAWQYLDGEFDHATMVEKAVAATRQLAKRQLTWLRGWPELHWLASGDEGNLDKLVQ 303