Pairwise Alignments

Query, 653 a.a., DNA mismatch repair protein MutL from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., DNA mismatch repair protein from Pseudomonas fluorescens FW300-N2E3

 Score =  453 bits (1166), Expect = e-132
 Identities = 270/628 (42%), Positives = 364/628 (57%), Gaps = 39/628 (6%)

Query: 3   IRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNGSG 62
           I +L  RLANQIAAGEVVERPASV+KEL+ENSLD+GA RID+D+E+GG KL+R+RD+GSG
Sbjct: 11  IELLSPRLANQIAAGEVVERPASVIKELLENSLDSGAKRIDVDVEQGGVKLLRVRDDGSG 70

Query: 63  IDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEAWS 122
           I  D+L LAL+RHATSKI  L+DLE +MSLGFRGEALASISSV+RLTLTSRT   ++AW 
Sbjct: 71  ISSDDLPLALARHATSKIRNLEDLEQVMSLGFRGEALASISSVARLTLTSRTRGADQAWQ 130

Query: 123 AYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIALSR 182
             +EGRDMA ++QPAAHPVGT+VEV DLFFNTPARRKFL+TEKTEF H+ E++KR+AL+R
Sbjct: 131 VETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKTEKTEFDHLQEVIKRLALAR 190

Query: 183 FDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWITT 242
           FDV+F LRHNGK +     A     + +R+AA+CG  F++  L IE+E  GL L GW+  
Sbjct: 191 FDVAFHLRHNGKTILSLHEAHDDAARARRVAAICGAGFLEQALPIEIERNGLHLWGWVGL 250

Query: 243 PEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDVNV 302
           P   R Q+DLQY +VNGR +RDKL+ HA+RQ+Y   L   +  T+VLF E+DP  VDVNV
Sbjct: 251 PTFNRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPAGVDVNV 310

Query: 303 HPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINEGAFHLPHCAEEVNPPVVPMI 362
           HP KHEVRF   R+VHDF+Y  L  AL            E     P     V P  +   
Sbjct: 311 HPTKHEVRFRDGRMVHDFLYGTLHRAL-------GDVRPEDHLAAPVATAIVRPTGIEAG 363

Query: 363 DTTQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVRERAVSNPWVASPKTASTGKERYG 422
           +   Q  +  A     + P+  P  N    S             +  +P+  S       
Sbjct: 364 EFGPQGEMRLAANALLEQPQAQPSFNTTAGSG------AGAGYQYQYTPRPQS------- 410

Query: 423 SASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANIAIEKLGKAIQVVAGQYL 482
              V++ +AA  +     P+             ++         I  LG A+  + G Y+
Sbjct: 411 GVPVAEAQAAYREFFAPLPE------------ANATALPDGQGDIPPLGYALAQLKGIYI 458

Query: 483 LMSSPQGCVLISLYQAQQLKLRGLLNAQHGA--LKAQPLLVPLALKLNESEWQVAQRHSS 540
           L  + QG VL+ ++ A +  +   L     +  L  QPLLVP ++ +++ E   A+ H S
Sbjct: 459 LSENAQGLVLVDMHAAHERIMYERLKVAMASEGLSGQPLLVPESIAVSQREADCAEEHVS 518

Query: 541 ALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQL----LPDLLSYAASCSESQALSHQAL 596
              +LG EL+     ++ +  +P  L+Q    +L    L DL+ Y  S    QA  ++ L
Sbjct: 519 WFQRLGFELQRLGPETLAIRQIPALLKQAEANRLVHDVLADLMEYGTS-DRIQAHLNELL 577

Query: 597 ADWLTQRIVVEKRDYTLAEAIGLIAELE 624
                   +   R   L E  GL+ ++E
Sbjct: 578 GTMACHGAIRANRRLALPEMNGLLRDME 605