Pairwise Alignments

Query, 653 a.a., DNA mismatch repair protein MutL from Vibrio cholerae E7946 ATCC 55056

Subject, 624 a.a., DNA mismatch repair protein MutL from Xanthomonas campestris pv. campestris strain 8004

 Score =  361 bits (927), Expect = e-104
 Identities = 190/331 (57%), Positives = 234/331 (70%), Gaps = 3/331 (0%)

Query: 1   MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNG 60
           M IR LP  L NQIAAGEVVERPASVVKELVEN+LDAGATR+DIDLE+GG +LIRIRDNG
Sbjct: 1   MAIRQLPEILINQIAAGEVVERPASVVKELVENALDAGATRVDIDLEEGGVRLIRIRDNG 60

Query: 61  SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120
            GI  +EL LA+SRHATSKI +LDDLE + +LGFRGEAL SI+SVSR TL SR    E  
Sbjct: 61  GGIAPEELPLAVSRHATSKIASLDDLETVATLGFRGEALPSIASVSRFTLASRRPDAEHG 120

Query: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180
            +   EG  +  ++ P AH  GTTVEV +LFFN PARRKFLR E+TE  HI+E L+ +AL
Sbjct: 121 SALQIEGGRLG-EVMPRAHAPGTTVEVRELFFNVPARRKFLRAERTELGHIEEWLRSLAL 179

Query: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQGLKLHGWI 240
           +R DV   + HNGK  R+Y+        + RL    G  F +  LR++    GL+LHGW+
Sbjct: 180 ARPDVELRVSHNGKPSRRYKPGDL--YSDARLGETLGEDFARQALRVDHSGAGLRLHGWV 237

Query: 241 TTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQVDV 300
             P  +R  +D QY YVNGR +RD+ + HA++ +Y   L   +   YVLF+ELDP +VDV
Sbjct: 238 AQPHYSRASTDQQYLYVNGRSVRDRSVAHAVKMAYGDVLFHGRQPAYVLFLELDPARVDV 297

Query: 301 NVHPAKHEVRFHQARLVHDFIYQALSSALVQ 331
           NVHPAKHEVRF +ARL+HDF+Y+ L  AL Q
Sbjct: 298 NVHPAKHEVRFREARLIHDFVYRTLQDALAQ 328



 Score = 63.5 bits (153), Expect = 3e-14
 Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 8/199 (4%)

Query: 431 AAVYQTLMQTPDLSDEEPSTASTIVSSIEAVKANIAIEKLGKAIQVVAGQYLLMSSPQGC 490
           AA+Y     +    D +P  + T    + A   +  +  LG A+  + G Y+L  + +G 
Sbjct: 398 AALYAPAAGSALRDDGQPVLSGT---GLPATAHDSGVPPLGYAVAQLHGIYILAENAEGL 454

Query: 491 VLISLYQAQQLKLRGLLNAQHGA--LKAQPLLVPLALKLNESEWQVAQRHSSALLQLGIE 548
           +++ ++ A +      L   H +  L AQPLLVP+ L + E E   A+R +  L  LG E
Sbjct: 455 IVVDMHAAHERIGYERLKQAHDSIGLHAQPLLVPMTLAVGEREADTAEREADTLASLGFE 514

Query: 549 LKSRTNHSIMVMAVPQPLRQQNLQQLLPDLLSYAASCSESQALS---HQALADWLTQRIV 605
           +      S+ V ++P  L   + + LL D+L       +S+ ++    + L+       V
Sbjct: 515 ITRSGPQSLHVRSIPALLANADPEALLRDVLGDLREHGQSRRIATARDELLSTMACHGAV 574

Query: 606 VEKRDYTLAEAIGLIAELE 624
              R  T+ E   L+ ++E
Sbjct: 575 RANRRLTVPEMNALLRDME 593