Pairwise Alignments

Query, 653 a.a., DNA mismatch repair protein MutL from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., DNA mismatch repair protein from Synechococcus elongatus PCC 7942

 Score =  123 bits (309), Expect = 2e-32
 Identities = 102/332 (30%), Positives = 165/332 (49%), Gaps = 12/332 (3%)

Query: 2   TIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNGS 61
           TI+ LPA    ++AAGEV++  A+VV+EL ENSLDAG  R+ IDL     + +R+ D+G 
Sbjct: 6   TIQPLPAPWVARMAAGEVIDSLAAVVRELCENSLDAGTQRLVIDLWPEQWR-VRVADDGM 64

Query: 62  GIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEAW 121
           G+  + L LA   H +SK+    D      LGFRGEAL S++ + RLT+ SRT      W
Sbjct: 65  GLSLENLQLAALAHTSSKLS--PDRFTAEQLGFRGEALHSLARLGRLTIASRTADAAAGW 122

Query: 122 S-AYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180
             +Y  G    V   P A   G  VEV  LF +   RR+   +   +   + + ++ + L
Sbjct: 123 QISYDIGGQPQV-ATPIAIAPGCIVEVQQLFQDWLERRQSQPSPAQQLRAVQQQIQNLVL 181

Query: 181 SRFDVSFTLRHNGKIVRQYRAATTLPQQEKRLAAVCGN--PFVQHMLRIELEHQGLKLHG 238
           +   ++  +  N    R + A   +   ++RL  +  N  P       ++L  +G +L  
Sbjct: 182 AHPSITVQVTQND---RPWLAFAPVHHPQERLLQLLPNTSPADWRSQSLDLGSEG-QLQV 237

Query: 239 WITTPEGA-RQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIELDPHQ 297
            +  P+   R++ D     VNGR++R   +  A+  +   SL  D+F      +++ P Q
Sbjct: 238 VVGLPDRCHRRRPDWVKVAVNGRVVRVSELEQAMIGALHRSLPRDRFPVVFAHLQVPPSQ 297

Query: 298 VDVNVHPAKHEVRFHQARLVHDFIYQALSSAL 329
           VD + HPAK E+      +  + I +A++  L
Sbjct: 298 VDWHRHPAKAELFLQDLPVWCERIQEAIAQTL 329