Pairwise Alignments

Query, 653 a.a., DNA mismatch repair protein MutL from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., DNA mismatch repair protein (NCBI) from Rhodospirillum rubrum S1H

 Score =  291 bits (745), Expect = 6e-83
 Identities = 214/616 (34%), Positives = 304/616 (49%), Gaps = 78/616 (12%)

Query: 1   MTIRILPARLANQIAAGEVVERPASVVKELVENSLDAGATRIDIDLEKGGAKLIRIRDNG 60
           MTIR+LP  L N+IAAGEVVERPAS VKELVEN++DAGA+RIDI +  GG   I + D+G
Sbjct: 1   MTIRLLPPVLVNRIAAGEVVERPASAVKELVENAIDAGASRIDITMTDGGRARILVVDDG 60

Query: 61  SGIDKDELGLALSRHATSKIHTLDDLEAIMSLGFRGEALASISSVSRLTLTSRTVAQEEA 120
            G+D  EL LA+ RHATSK+   DDL  I +LGFRGEAL SI SV+RLTLTSR     +A
Sbjct: 61  RGMDPGELSLAVERHATSKLPG-DDLLDIHTLGFRGEALPSIGSVARLTLTSRAAGAGDA 119

Query: 121 WSAYSEGRDMAVKLQPAAHPVGTTVEVLDLFFNTPARRKFLRTEKTEFTHIDELLKRIAL 180
           W+   EG     + +PA+HP GT VEV DLF+ TPAR KFL+  +TE  H  +++ R+A+
Sbjct: 120 WALTVEGGAKG-EPEPASHPQGTRVEVRDLFYATPARLKFLKAPRTEQMHAVDVVHRLAM 178

Query: 181 SRFDVSFTL--------RHNGKIVRQYRAATTLPQQEKRLAAVCGNPFVQHMLRIELEHQ 232
           +   V FTL        R +G     + A  T      RL A+ G  F  + + IE E +
Sbjct: 179 AHPAVGFTLSDGTRQQIRLSGAQGELFEARLT------RLGAILGREFSDNAIAIEAERE 232

Query: 233 GLKLHGWITTPEGARQQSDLQYCYVNGRMMRDKLINHAIRQSYETSLRVDQFATYVLFIE 292
           G++L G    P   +  S  QY +VNGR +RDKL++ A+R +Y+  L  D+ A   L+++
Sbjct: 233 GIRLTGHAALPTYNKATSAGQYLFVNGRPVRDKLLHGAVRGAYQDVLAHDRNAVLALYLD 292

Query: 293 LDPHQVDVNVHPAKHEVRFHQARLVHDFIYQALSSALVQGAQVMAPTINEGAFHLPHCAE 352
           L P  VDVNVHPAK EVRF    LV   I  AL  AL       + T++  A      A+
Sbjct: 293 LPPEMVDVNVHPAKAEVRFRDPGLVRGLIIGALRHALAAAGHRASSTVSLAALGALRPAQ 352

Query: 353 EVNPPVVPM-------------IDTTQQERVWQAVQNTPDYPRKAPRDNDRDESDNPQVR 399
               P +P              ++  +     QA   TPD                    
Sbjct: 353 GSGAPALPWGAGGYGGGASHPGLEERRSAYAAQAPAGTPD-------------------- 392

Query: 400 ERAVSNPWVASPKTASTGKERYGSASVSKKEAAVYQTLMQTPDLSDEEPSTASTIVSSIE 459
                 PW      A  G    G A+++    A               P  A  +    E
Sbjct: 393 ------PWAGRGMGAGGGS---GQAAMAWLAGA---------------PPAAPRLAGEPE 428

Query: 460 AVKANIAIEKLGKAIQVVAGQYLLMSSPQGCVLISLYQAQQL----KLRGLLNAQHGALK 515
           A         LG A   +   Y++  +  G V++  + A +     +++  L A+ G + 
Sbjct: 429 APPTGAEDFPLGAARGQIHDTYIIAQTRDGVVIVDQHAAHERLVMERMKAAL-AERGEVA 487

Query: 516 AQPLLVPLALKLNESEWQVAQRHSSALLQLGIELKSRTNHSIMVMAVPQPLRQQNLQQLL 575
            Q LL+P  ++L+E         ++ L +LG+ ++     +++V  VP  L   +++ L+
Sbjct: 488 RQILLLPEVVELDEPGAVRVATAAAELAKLGLVVEGFGPGAVVVREVPALLGDTDVKGLV 547

Query: 576 PDLLSYAASCSESQAL 591
            DL    A    +QAL
Sbjct: 548 ADLAEGLAEWGTAQAL 563